BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC49ZB06RM1.SCF screened BAC_end (965 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1563 1318 0.0 >3x_Contig1563 Length = 10839 Score = 1318 bits (665), Expect = 0.0 Identities = 725/737 (98%), Gaps = 6/737 (0%) Strand = Plus / Minus Query: 51 aacaatcaaaactctcgttgatcctagctaggacataggctcggaggaagcgtttgtgcc 110 ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 1348 aacaatcaaaactctcgttgatcctag-taggacatagtctcggaggaagcgtttgtgcc 1290 Query: 111 aatctgtatgagcatttaccagaatacatcaagagacataccacaggattggccatgcta 170 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1289 aatctgtatgagcatttaccagaatacatcaagagacataccacaggattggccatgcta 1230 Query: 171 gatattgtcgaagagatggcaaagtttgtgttgactaaggtagatcatttcctttctgtc 230 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1229 gatattgtcgaagagatggcaaagtttgtgttgactaaggtagatcatttcctttctgtc 1170 Query: 231 actcccaatgtctttggttctgctaaagaagcagtagattggtatcaat-ctcataacta 289 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1169 actcccaatgtctttggttctgctaaagaagcagtagattggtatcaatactcataacta 1110 Query: 290 ttctaaactgaaagaaagtgcagagatctctgttccagcgctattccataaggcaaaatc 349 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1109 ttctaaactgaaagaaagtgcagaaatctctgttccagcgctattccataaggcaaaatc 1050 Query: 350 aggcaaagttgtacggataacgaatcttgcatcattcaagccatattgggat-tctt-gg 407 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || Sbjct: 1049 aggcaaagttgtacggataacgaatcttgcatcattcaagccatattgggatatctttgg 990 Query: 408 ttcgatggattatctgccaaattcgtatcacttccaaccagtaaacttctcatcttagca 467 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 989 ttcaatggattatctgccaaattcgtatcacttccaaccagtaaacttctcatcttagca 930 Query: 468 ggcaatgataatttggataaggaactaattgttggccaaatgcaaggtaagtaccagcta 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 929 ggcaatgataatttggataaggaactaattgttggccaaatgcaaggtaagtaccagcta 870 Query: 528 attgtgttccaggattctggacatttcattcaagaggacgttcccaaaaaggcagctatt 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 869 attgtgttccaggattctggacatttcattcaagaggacgttcccaaaaaggcagctatt 810 Query: 588 tctctagtggatttttggaaacgtagtgataataggaacgttacaa-taaaacgaattgg 646 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 809 tctctagtggatttttggaaacgtagtgctaataggaacgttacaattaaaacgaattgg 750 Query: 647 ggcagctctcaaaataagaccttagagggaaaaaagactgttgagtgatgtttgccttgg 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 ggcagctctcaaaataagaccttagagggaaaaaagactgttgagtgatgtttgccttgg 690 Query: 707 tactctgtcatgagtaaataacattttgaaggaattgactgtcataatcggatcatatgg 766 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 689 tactctgtcatgagtaaataaca-tttgaaggaattgactgtcataatcgtatcatatgt 631 Query: 767 atatatatatatatata 783 ||||||||||||||||| Sbjct: 630 atatatatatatatata 614 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 11,259 Number of Sequences: 1807 Number of extensions: 11259 Number of successful extensions: 1389 Number of sequences better than 1.0e-20: 1 length of query: 965 length of database: 10,358,551 effective HSP length: 16 effective length of query: 949 effective length of database: 10,329,639 effective search space: 9802827411 effective search space used: 9802827411 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)