BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC49ZB07FM1.SCF screened BAC_end (902 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1797 1467 0.0 >3x_Contig1797 Length = 34782 Score = 1467 bits (740), Expect = 0.0 Identities = 802/818 (98%), Gaps = 4/818 (0%) Strand = Plus / Minus Query: 88 tcgaagaatatggtagcgcctataattacatccaaaaaattactcgtgcaagtgctaatc 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30295 tcgaagaatatggtagcgcctataattacatccaaaaaattactcgtgcaagtgctaatc 30236 Query: 148 agaaaacggcagaggtgttgcattttaaatctcaaagtattaatttaaaaatattaatga 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30235 agaaaacggcagaggtgttgcattttaaatctcaaagtattaatttaaaaatattaatga 30176 Query: 208 acaacattagccttgaactttccatggatcctattaaatcaaccctacctcatacacttt 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30175 acaacattagccttgaactttccatggatcctattaaatcaaccctacctcatacacttt 30116 Query: 268 ttgatgttgaaaaaatatcattactattaatcagaggcgataaaaaagttcttattggaa 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30115 ttgatgttgaaaaaatatcattactattaatcagaggcgataaaaaagttcttattggaa 30056 Query: 328 cactgtcgaatctcataataagttcaaaaactaacggctgttttcacgttgaatccttcg 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30055 cactgtcgaatctcataataagttcaaaaactaacggctgttttcacgttgaatccttcg 29996 Query: 388 accataagtttggtgcaatcgacataaatacccgcacaaaagctgttctagagtcattac 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29995 accataagtttggtgcaatcgacataaatacccgcacaaaagctgttctagagtcattac 29936 Query: 448 atctatttctttctcaagctgaactggaattaatatcttccaatttgattgcattctgtg 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29935 atctatttctttctcaagctgaactggaattaatatcttccaatttgattgcattctgtg 29876 Query: 508 gttctatttcgtcatttacaaatcccaatactagaaacaacggccatgaaaatgttacta 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29875 gttctatttcgtcatttacaaatcccaatactagaaacaacggccatgaaaatgttacta 29816 Query: 568 aaaagagcgttagattgttgcattcttctaatgttatgaataaaagggctactctttcaa 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29815 aaaagagcgttagattgttgcattcttctaatgttatgaataaaagggctactctttcaa 29756 Query: 628 acttcgttcttcaggtccataaagctaagatgaccattacaaacactcttg-aaacactt 686 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 29755 acttcgttcttcaggtccataaagctaagatgaccattacaaacactcttgaaaacactt 29696 Query: 687 tcggtgacataacaatagaggcaaatttcgtgtatactatctcangacccaaataagaca 746 |||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||| Sbjct: 29695 tcggtgacataacaatagaggc-aatttcgtgtatactatctcaggaccaaaataagaca 29637 Query: 747 ctctgtggcattgttaaagaaacagggctac-acggctgtacatgagagagaaaaccgac 805 ||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||| Sbjct: 29636 ctctgtggcattgttaaagaagcaaggctacaacggctgtacatgagagagaaaaccgac 29577 Query: 806 attatatgntatgtaaaccatgatatgagtaaacccacattgattttaaacatgcc-aac 864 |||||||| ||||||||||||||| |||||||| |||||| ||||||||||| ||| Sbjct: 29576 attatatgtaatgtaaaccatgatagaagtaaaccacaattgatattaaacatgccaaac 29517 Query: 865 tctggaaaaccgaagctttatttgaaagggttgggatt 902 |||||||||||||||||||||||||||||||||||||| Sbjct: 29516 tctggaaaaccgaagctttatttgaaagggttgggatt 29479 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6744 Number of Sequences: 1807 Number of extensions: 6744 Number of successful extensions: 47 Number of sequences better than 1.0e-20: 1 length of query: 902 length of database: 10,358,551 effective HSP length: 16 effective length of query: 886 effective length of database: 10,329,639 effective search space: 9152060154 effective search space used: 9152060154 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)