BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC49ZB08FM1.SCF screened BAC_end
         (945 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig682                                                         1287   0.0  

>3x_Contig682 
          Length = 2655

 Score = 1287 bits (649), Expect = 0.0
 Identities = 751/777 (96%), Gaps = 6/777 (0%)
 Strand = Plus / Plus

                                                                        
Query: 87   tatacactgggttcatccaattacgtgctggttcgtctgttgggttaagtggtctatctg 146
            ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||
Sbjct: 1883 tatacactgggttcatccaattaggtgctggtttgtctgttgggttaagtggtctagctg 1942

                                                                        
Query: 147  ctggtttcgccattggtattgttggtgatgcaggtgttagaggtactgctcaacaaccaa 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1943 ctggtttcgccattggtattgttggtgatgcaggtgttagaggtactgctcaacaaccaa 2002

                                                                        
Query: 207  gattattcgttgtttttattttgatcttgattttcgctgaagttttgggtttgtacggtt 266
            |||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2003 gattattcgttggtatgattttgatcttgattttcgctgaagttttgggtttgtacggtt 2062

                                                                        
Query: 267  tgattgttgccctattgttgaactctagagctactcaagatgtcgtttgttaattttaag 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2063 tgattgttgccctattgttgaactctagagctactcaagatgtcgtttgttaattttaag 2122

                                                                        
Query: 327  gatctccaagaaaaacatgaggaaatcataatatagtgcactgaaataaagattttaata 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2123 gatctccaagaaaaacatgaggaaatcataatatagtgcactgaaataaagattttaata 2182

                                                                        
Query: 387  tgaatgcactcattgactctgtggtaagatcgataatgggaatccaatatatcgtttgtt 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2183 tgaatgcactcattgactctgtggtaagatcgataatgggaatccaatatatcgtttgtt 2242

                                                                        
Query: 447  cgttttcagattcgtttgactctttcgtaccgttccttcatttttcatttactcatcctt 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2243 cgttttcagattcgtttgactctttcgtaccgttccttcatttttcatttactcatcctt 2302

                                                                        
Query: 507  tttttattttattagatcaacttcgaatgtcatgcccgttagtttcttatgggaatacaa 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2303 tttttattttattagatcaacttcgaatgtcatgcccgttagtttcttatgggaatacaa 2362

                                                                        
Query: 567  tctctgcaatctttcatagaatctctatttagagtagaacataaaaagcacttatctaat 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2363 tctctgcaatctttcatagaatctctatttagagtagaacataaaaagcacttatctaat 2422

                                                                        
Query: 627  ctagtgcagtctgtttataatattaaacacagtcaaaaatctaaagaa-aaaaatataca 685
            |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 2423 ctagtgcagtctgtttataatattaaacacagtcaaaaatctaaagaataaaattataca 2482

                                                                        
Query: 686  gtttaaagtttacaaggttgagattaattatcgctgtatttt-attcaaggaaatccacc 744
            |||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||
Sbjct: 2483 gtttaaagtttacaaggttgagattaattatcgctgtattttcatccaaggaattccacc 2542

                                                                        
Query: 745  cctagatgttacgttatattgaaatctatgtttaattatgcttcattgaaaaattgacat 804
            |   |||||||||||||||||||||||||| ||||||||||| || ||||| ||||||||
Sbjct: 2543 ctaggatgttacgttatattgaaatctatg-ttaattatgctaca-tgaaagattgacat 2600

                                                                     
Query: 805  attttattattttaagatcttcctttcattctgaatgaaacgattcaacagattcag 861
            ||||||| |||| ||| |||||||| |||  |||||| ||||| |||||||||||||
Sbjct: 2601 attttataatttaaag-tcttccttacatcttgaatg-aacgagtcaacagattcag 2655


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8932
Number of Sequences: 1807
Number of extensions: 8932
Number of successful extensions: 80
Number of sequences better than 1.0e-20: 1
length of query: 945
length of database: 10,358,551
effective HSP length: 16
effective length of query: 929
effective length of database: 10,329,639
effective search space: 9596234631
effective search space used: 9596234631
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)