BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC49ZB08FM1.SCF screened BAC_end (945 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig682 1287 0.0 >3x_Contig682 Length = 2655 Score = 1287 bits (649), Expect = 0.0 Identities = 751/777 (96%), Gaps = 6/777 (0%) Strand = Plus / Plus Query: 87 tatacactgggttcatccaattacgtgctggttcgtctgttgggttaagtggtctatctg 146 ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||| Sbjct: 1883 tatacactgggttcatccaattaggtgctggtttgtctgttgggttaagtggtctagctg 1942 Query: 147 ctggtttcgccattggtattgttggtgatgcaggtgttagaggtactgctcaacaaccaa 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1943 ctggtttcgccattggtattgttggtgatgcaggtgttagaggtactgctcaacaaccaa 2002 Query: 207 gattattcgttgtttttattttgatcttgattttcgctgaagttttgggtttgtacggtt 266 |||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2003 gattattcgttggtatgattttgatcttgattttcgctgaagttttgggtttgtacggtt 2062 Query: 267 tgattgttgccctattgttgaactctagagctactcaagatgtcgtttgttaattttaag 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2063 tgattgttgccctattgttgaactctagagctactcaagatgtcgtttgttaattttaag 2122 Query: 327 gatctccaagaaaaacatgaggaaatcataatatagtgcactgaaataaagattttaata 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2123 gatctccaagaaaaacatgaggaaatcataatatagtgcactgaaataaagattttaata 2182 Query: 387 tgaatgcactcattgactctgtggtaagatcgataatgggaatccaatatatcgtttgtt 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2183 tgaatgcactcattgactctgtggtaagatcgataatgggaatccaatatatcgtttgtt 2242 Query: 447 cgttttcagattcgtttgactctttcgtaccgttccttcatttttcatttactcatcctt 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2243 cgttttcagattcgtttgactctttcgtaccgttccttcatttttcatttactcatcctt 2302 Query: 507 tttttattttattagatcaacttcgaatgtcatgcccgttagtttcttatgggaatacaa 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2303 tttttattttattagatcaacttcgaatgtcatgcccgttagtttcttatgggaatacaa 2362 Query: 567 tctctgcaatctttcatagaatctctatttagagtagaacataaaaagcacttatctaat 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2363 tctctgcaatctttcatagaatctctatttagagtagaacataaaaagcacttatctaat 2422 Query: 627 ctagtgcagtctgtttataatattaaacacagtcaaaaatctaaagaa-aaaaatataca 685 |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 2423 ctagtgcagtctgtttataatattaaacacagtcaaaaatctaaagaataaaattataca 2482 Query: 686 gtttaaagtttacaaggttgagattaattatcgctgtatttt-attcaaggaaatccacc 744 |||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||| Sbjct: 2483 gtttaaagtttacaaggttgagattaattatcgctgtattttcatccaaggaattccacc 2542 Query: 745 cctagatgttacgttatattgaaatctatgtttaattatgcttcattgaaaaattgacat 804 | |||||||||||||||||||||||||| ||||||||||| || ||||| |||||||| Sbjct: 2543 ctaggatgttacgttatattgaaatctatg-ttaattatgctaca-tgaaagattgacat 2600 Query: 805 attttattattttaagatcttcctttcattctgaatgaaacgattcaacagattcag 861 ||||||| |||| ||| |||||||| ||| |||||| ||||| ||||||||||||| Sbjct: 2601 attttataatttaaag-tcttccttacatcttgaatg-aacgagtcaacagattcag 2655 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8932 Number of Sequences: 1807 Number of extensions: 8932 Number of successful extensions: 80 Number of sequences better than 1.0e-20: 1 length of query: 945 length of database: 10,358,551 effective HSP length: 16 effective length of query: 929 effective length of database: 10,329,639 effective search space: 9596234631 effective search space used: 9596234631 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)