BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC49ZC11FM1.SCF screened BAC_end (929 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1594 1465 0.0 >3x_Contig1594 Length = 9813 Score = 1465 bits (739), Expect = 0.0 Identities = 813/835 (97%), Gaps = 2/835 (0%) Strand = Plus / Plus Query: 86 gcctcaattggaagcagagttcaagaacaagggcctgtcaaagaagattaaggtaaatta 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5557 gcctcaattggaagcagagttcaagaacaagggcctgtcaaagaagattaaggtaaatta 5616 Query: 146 tcaactagatgctgaaccaagagtcgtggaaaatctagaaactgataacgtgcaaactga 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5617 tcaactagatgctgaaccaagagtcgtggaaaatctagaaactgataacgtgcaaactga 5676 Query: 206 gactgtcatttttttatccaaggaaactattgctagtggttcgaaagctacagaagagtc 265 |||||||||| || | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5677 gactgtcattccttcagccaaggaaactattgctagtggttcgaaagctacagaagagtc 5736 Query: 266 cgctagtgaaccggtacaaaagaaatctgtcccggttgcatctgccaatactgacctgga 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5737 cgctagtgaaccggtacaaaagaaatctgtcccggttgcatctgccaatactgacctgga 5796 Query: 326 tactgaaaagccaaaagttgtggaaagtgaaccaaagctcgatgaaaaggtcaaatctga 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5797 tactgaaaagccaaaagttgtggaaagtgaaccaaagctcgatgaaaaggtcaaatctga 5856 Query: 386 taccagcgctaacactgaaattattgcagaacccgctagtacgtcgaatattgcaccggc 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5857 taccagcgctaacactgaaattattgcagaacccgctagtacgtcgaatattgcaccggc 5916 Query: 446 cgtggtcatttggatcgttataggtttcttactttggtattggttatcttaggatacatt 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5917 cgtggtcatttggatcgttataggtttcttactttggtattggttatcttaggatacatt 5976 Query: 506 ctgattaagtgagggaactatcaaccatcgtataatatatgacaacatatttctcgactt 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5977 ctgattaagtgagggaactatcaaccatcgtataatatatgacaacatatttctcgactt 6036 Query: 566 tgatagaaatgttgttatgaattatattcgtatttcttttcttatctacgtctgtttctt 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6037 tgatagaaatgttgttatgaattatattcgtatttcttttcttatctacgtctgtttctt 6096 Query: 626 ttgttttaattacccccgtactttttaacctgtttgttcttttctttgcaggatttcttc 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6097 ttgttttaattacccccgtactttttaacctgtttgttcttttctttgcaggatttcttc 6156 Query: 686 atgcggctaaaatcattcttcattattgttattgtattatcattacagccattagtacta 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6157 atgcggctaaaatcattcttcattattgttattgtattatcattacagccattagtacta 6216 Query: 746 tgtttttccctagccaagacattgacaagatatttgagttagtattgaaaattgtcatct 805 |||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 6217 tgttttcccctagccaagacattgacaagatatttgagttagtattgaaattgttcatct 6276 Query: 806 tgtgacacaggctgttc-tttcattcgtggttcgttgaaacaactcattggaaacaaagg 864 ||||||||| ||||||| |||||| || |||||||||||||||||||| ||||||||| Sbjct: 6277 tgtgacaca-gctgttcttttcatcgttgtttcgttgaaacaactcattgaaaacaaagg 6335 Query: 865 aggacgaaagatattgaaactattcttcttcaaattgatcccaatttactcagca 919 |||||||||||||||| ||||| |||||||||||||||||| ||||||||| Sbjct: 6336 gagacgaaagatattgaactaattctccttcaaattgatcccaatatactcagca 6390 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8100 Number of Sequences: 1807 Number of extensions: 8100 Number of successful extensions: 58 Number of sequences better than 1.0e-20: 1 length of query: 929 length of database: 10,358,551 effective HSP length: 16 effective length of query: 913 effective length of database: 10,329,639 effective search space: 9430960407 effective search space used: 9430960407 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)