BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC49ZD02RM1.SCF screened BAC_end
         (937 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1696                                                        1695   0.0  

>3x_Contig1696 
          Length = 16725

 Score = 1695 bits (855), Expect = 0.0
 Identities = 884/891 (99%), Gaps = 2/891 (0%)
 Strand = Plus / Plus

                                                                        
Query: 49   ttgaaccttcccttcttctccgtgttcgagagcggtttt-cacatgtgaactcc-cagta 106
            ||||||||| |||||||||||||||| |||||||||||| |||||||||||||| |||||
Sbjct: 7865 ttgaacctttccttcttctccgtgtttgagagcggttttacacatgtgaactccacagta 7924

                                                                        
Query: 107  tgagggatagggtgtttttgtatgtgttctgaaactgttcttttgtgctccttctcagtt 166
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7925 tgagggatagggtgtttttgtatgtgttctgaaactgttcttttgtgctccttctcagtt 7984

                                                                        
Query: 167  cctgtggggacctcctcgtgagtcaggcaagaggctacgacgctttgtacgtcgaatact 226
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7985 cctgtggggacctcctcgtgagtcaggcaagaggctacgacgctttgtacgtcgaatact 8044

                                                                        
Query: 227  tgatcggtgtttaacgagagagttacattgtatgtcacagcggtcgaacaattggatagg 286
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8045 tgatcggtgtttaacgagagagttacattgtatgtcacagcggtcgaacaattggatagg 8104

                                                                        
Query: 287  ctcgaagattgcaatttagaatccacatcagcaaagatagttttgaaaactctttcgtct 346
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8105 ctcgaagattgcaatttagaatccacatcagcaaagatagttttgaaaactctttcgtct 8164

                                                                        
Query: 347  tctgttagatcaattttcaaaacagtatcctttaattccatacctggcaattgtaaattg 406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8165 tctgttagatcaattttcaaaacagtatcctttaattccatacctggcaattgtaaattg 8224

                                                                        
Query: 407  atctctttcggatattcggagcctgcatcaaaaacaagctttgatatattagtgttttga 466
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8225 atctctttcggatattcggagcctgcatcaaaaacaagctttgatatattagtgttttga 8284

                                                                        
Query: 467  atagaaaatccaaaagaatgagtagttctatctatgactttcattggtcgcgtcttgaat 526
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8285 atagaaaatccaaaagaatgagtagttctatctatgactttcattggtcgcgtcttgaat 8344

                                                                        
Query: 527  tccttggataattggacgccacgaatggctgctccattgacggcagattcatcagagttg 586
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8345 tccttggataattggacgccacgaatggctgctccattgacggcagattcatcagagttg 8404

                                                                        
Query: 587  acatttttagaaattaagctggctcctagatggttttccaattgctttttgacgaaaggc 646
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8405 acatttttagaaattaagctggctcctagatggttttccaattgctttttgacgaaaggc 8464

                                                                        
Query: 647  accctagtagaaccaccagttaatatcacagaatccaaatctttaacattcagtgcttta 706
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8465 accctagtagaaccaccagttaatatcacagaatccaaatctttaacattcagtgcttta 8524

                                                                        
Query: 707  ccgttcaatggagattctagcgtggacaaaattggttctataacaacggattgtaattct 766
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8525 ccgttcaatggagattctagcgtggacaaaattggttctataacaacggattgtaattct 8584

                                                                        
Query: 767  gccacgaattcttcaaactttgctctagtaatagtagtttttgagtccaaatcatgatat 826
            |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||
Sbjct: 8585 gccacgaattcttcaaactttgctctagtaatagtagttttgaagtccaaatcatgatat 8644

                                                                        
Query: 827  aatgattcaatcgatatagatgcatcagagttggcacttaggaccaactttgctttctct 886
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8645 aatgattcaatcgatatagatgcatcagagttggcacttaggaccaactttgctttctct 8704

                                                               
Query: 887  gccgtttggactagctttgcttttgcactggcatcagattcgaattgctct 937
            |||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8705 gccgcttggactagctttgcttttgcactggcatcagattcgaattgctct 8755


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6688
Number of Sequences: 1807
Number of extensions: 6688
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 937
length of database: 10,358,551
effective HSP length: 16
effective length of query: 921
effective length of database: 10,329,639
effective search space: 9513597519
effective search space used: 9513597519
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)