BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC49ZD03RM1.SCF screened BAC_end (943 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1665 1479 0.0 >3x_Contig1665 Length = 15710 Score = 1479 bits (746), Expect = 0.0 Identities = 851/876 (97%), Gaps = 8/876 (0%) Strand = Plus / Minus Query: 60 atgcgatgcctttctggctctaatctaagctagttttttctgtcaa-gacaaatactgga 118 ||||||||||||||||| |||| || |||||||||||||||||||| ||||||||||||| Sbjct: 1029 atgcgatgcctttctggttctagtcgaagctagttttttctgtcaaagacaaatactgga 970 Query: 119 aattggttaaatgtaaagataaaaatacagaaatgttgaataggatagataggatgctat 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 969 aattggttaaatgtaaagataaaaatacagaaatgttgaataggatagataggatgctat 910 Query: 179 taggaacctacatttggttcttttgtagctagtaaagtacttaaagcaggtttatgaggc 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 909 taggaacctacatttggttcttttgtagctagtaaagtacttaaagcaggtttatgaggc 850 Query: 239 cattgaaatcataagtggcttacacagcttaattttagccatttgaaacagacataacac 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 cattgaaatcataagtggcttacacagcttaattttagccatttgaaacagacataacac 790 Query: 299 ccttacattacatattaattcgacatgtttttccaattacatgtcaaccaccatgaaaaa 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 789 ccttacattacatattaattcgacatgtttttccaattacatgtcaaccaccatgaaaaa 730 Query: 359 aaaaggaaaacaaaagtttgaatctgaaccttttctattgccgtgaaaacaatgaacaaa 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 729 aaaaggaaaacaaaagtttgaatctgaaccttttctattgccgtgaaaacaatgaacaaa 670 Query: 419 gcagacagataaccttgataaaagccaagcaaatccagcatatatcttaatacgttgagc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 669 gcagacagataaccttgataaaagccaagcaaatccagcatatatcttaatacgttgagc 610 Query: 479 atcacaagcaaaattgcttgactttgtgtttttgtctttcctctcctggaccaataaata 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 609 atcacaagcaaaattgcttgactttgtgtttttgtctttcctctcctggaccaataaata 550 Query: 539 tcgaataaaagatgtcatatcaccaaccttcaattccctccattgatgcaaatagtaaca 598 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 549 tcgaataaaagatgtcatatcaccaaccttcaattccctccattgatgcaaatagtaaca 490 Query: 599 cgaacgggttttaccagccatcacaacagtattcgttccctcaaggatctatggcttttg 658 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 489 cgaacgggttttaccagccatcacaacagtattcgttccctcaaggatctatggcttttg 430 Query: 659 gaaatgggatgcagggatctggcatggatttcggtggcagtaaacctagtggtacgccag 718 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 429 gaaatgggatgcagggatctggcatggatttcggtggcagtaaacctagtggtacgccag 370 Query: 719 ctaatttcacanatgagcagttgacaccaggtcttttttaatgccttatctacccgtggg 778 ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 369 ctaatttcacaaatgagcagttgacaccaggtc-tttttaatgccttatctacccgtggg 311 Query: 779 tattcattcgaaaccttc-ttgcttgaagaattggnaataatttccacccgtataattgc 837 |||||||||| ||||||| |||||||||||||||| ||| | || || |||||||||||| Sbjct: 310 tattcattcg-aaccttctttgcttgaagaattgggaatcaatttcaaccgtataattgc 252 Query: 838 taagac-aaatttgtgttagtaccgcntttctcacaaagg-ttattgaaagaaatccaag 895 |||||| ||||||||||||||||||| ||||||||||||| |||| |||||| ||||| | Sbjct: 251 taagacaaaatttgtgttagtaccgc-tttctcacaaaggtttatcgaaagacatccagg 193 Query: 896 a-gatttcgaatctgctgggcccataatcttttggt 930 | |||| ||| |||||||||||| |||||||||| Sbjct: 192 aggattccgatcttgctgggcccattatcttttggt 157 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7653 Number of Sequences: 1807 Number of extensions: 7653 Number of successful extensions: 68 Number of sequences better than 1.0e-20: 1 length of query: 943 length of database: 10,358,551 effective HSP length: 16 effective length of query: 927 effective length of database: 10,329,639 effective search space: 9575575353 effective search space used: 9575575353 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)