BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC49ZD10FM1.SCF screened BAC_end (887 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1675 1300 0.0 >3x_Contig1675 Length = 13954 Score = 1300 bits (656), Expect = 0.0 Identities = 690/698 (98%), Gaps = 3/698 (0%) Strand = Plus / Plus Query: 86 caatcttcgagtcagataacgagacacctaccaaaataacttgagagtcaataccatgct 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10944 caatcttcgagtcagataacgagacacctaccaaaataacttgagagtcaataccatgct 11003 Query: 146 cagcctgtgatagcaaatccgatgcaacaaagtcaacatcagcttcttcatcacaaatga 205 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 11004 cagcctgtgatagcaaatccgatgcaacaaattcaacatcagcttcttcatcacaaatga 11063 Query: 206 ccaagacttcacttggaccagctggcatatcgatagaacataaagcttgagtgtcgtttt 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11064 ccaagacttcacttggaccagctggcatatcgatagaacataaagcttgagtgtcgtttt 11123 Query: 266 gaacatacatttttgctgcggtaacaaactggttaccagggcctaagatttt-gtccact 324 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 11124 gaacatacatttttgctgcggtaacaaactggttaccagggcctaagatttttgtccact 11183 Query: 325 ttaggaacggattcagtaccgtaggccattgcagcaatagcttgtgcaccacctgctaat 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11184 ttaggaacggattcagtaccgtaggccattgcagcaatagcttgtgcaccacctgctaat 11243 Query: 385 acgatctttgaagcaccgactttacttgcaacataaacaacttcaggagaaactctaccg 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11244 acgatctttgaagcaccgactttacttgcaacataaacaacttcaggagaaactctaccg 11303 Query: 445 tcagactttcttggaggtgatgcgaaaacaatttctttacatccagcaacctgngccggt 504 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 11304 tcagactttcttggaggtgatgcgaaaacaatttctttacatccagcaacctgggccggt 11363 Query: 505 acacctaacataagcgcagtacttggtaagattgctgtaccacccggaatgtatagacca 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11364 acacctaacataagcgcagtacttggtaagattgctgtaccacccggaatgtatagacca 11423 Query: 565 accttttcgataggtctagggaacctagagcagacaacacctggttgagtttcgacatct 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11424 accttttcgataggtctagggaacctagagcagacaacacctggttgagtttcgacatct 11483 Query: 625 anggtttcactttgcatttgagcagcgtggaacttttttacattttcaatagacaggtcc 684 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11484 agggtttcactttgcatttgagcagcgtggaacttttttacattttcaatagacaggtcc 11543 Query: 685 aaagcatctcttagttcatcagtcaatccatcaaggtattcttctggataaggtgccttc 744 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 11544 aaagcatctcttagttcatcagtcaatccatcaaggtattcttctggataaggtgcc-tc 11602 Query: 745 ccaaactggtggtttctaattgaacaccatcgaactta 782 | |||||||| ||||||||||| ||||||||||||||| Sbjct: 11603 caaaactggt-gtttctaattggacaccatcgaactta 11639 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5135 Number of Sequences: 1807 Number of extensions: 5135 Number of successful extensions: 34 Number of sequences better than 1.0e-20: 1 length of query: 887 length of database: 10,358,551 effective HSP length: 16 effective length of query: 871 effective length of database: 10,329,639 effective search space: 8997115569 effective search space used: 8997115569 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)