BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC49ZD11RM1.SCF screened BAC_end
         (943 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1696                                                        1626   0.0  

>3x_Contig1696 
          Length = 16725

 Score = 1626 bits (820), Expect = 0.0
 Identities = 875/890 (98%), Gaps = 3/890 (0%)
 Strand = Plus / Plus

                                                                         
Query: 51    agaatactaccgatgggcacaaaaattcagaaccgttgcc-catgagcgtaaagaagaca 109
             ||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 10060 agaatactagcgatgggcagaaaaattcagaaccgttgccacatgagcgtaaagaagaca 10119

                                                                         
Query: 110   aggtagccagaaatactgatgttaatgttacaggtggaaaaggacaaaataatgtgaaat 169
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10120 aggtagccagaaatactgatgttaatgttacaggtggaaaaggacaaaataatgtgaaat 10179

                                                                         
Query: 170   cagtacatcaaaatcccggaggacctcaaagggcgtcaccaagtccgtctcgttctaacc 229
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10180 cagtacatcaaaatcccggaggacctcaaagggcgtcaccaagtccgtctcgttctaacc 10239

                                                                         
Query: 230   gcaacaacaatcactcaataactgatacaaggcgtggaccgtcgcatgcggactatgcga 289
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10240 gcaacaacaatcactcaataactgatacaaggcgtggaccgtcgcatgcggactatgcga 10299

                                                                         
Query: 290   atcagagaaagcaggattcgagaagaggtccggctccgccagtgaatcagcatacctcta 349
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10300 atcagagaaagcaggattcgagaagaggtccggctccgccagtgaatcagcatacctcta 10359

                                                                         
Query: 350   gatatggaaaaagtcccagacaggataacagggaaaggcaaagtcgattccagagaaatg 409
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10360 gatatggaaaaagtcccagacaggataacagggaaaggcaaagtcgattccagagaaatg 10419

                                                                         
Query: 410   attcatcaatatctaaaccggcattcaacagtgacaacagcttccagcagaacagagggc 469
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10420 attcatcaatatctaaaccggcattcaacagtgacaacagcttccagcagaacagagggc 10479

                                                                         
Query: 470   atgaagtgcgcaacggtaggtttgacaacaaaaatagatggtctgatgcaagtaatgcct 529
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10480 atgaagtgcgcaacggtaggtttgacaacaaaaatagatggtctgatgcaagtaatgcct 10539

                                                                         
Query: 530   ctcattcgcggaataccaacttacaggtcaaaaacaatcaagcagatgattcagaaggcc 589
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10540 ctcattcgcggaataccaacttacaggtcaaaaacaatcaagcagatgattcagaaggcc 10599

                                                                         
Query: 590   ataactttcgtaaacctacagagtggaagaaagatctgtctcataacacacgtggacgtt 649
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10600 ataactttcgtaaacctacagagtggaagaaagatctgtctcataacacacgtggacgtt 10659

                                                                         
Query: 650   tcgaacctaacaaaaacaggtttgggcatgctcaagcggaaaggtataggacaaaaaccc 709
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10660 tcgaacctaacaaaaacaggtttgggcatgctcaagcggaaaggtataggacaaaaaccc 10719

                                                                         
Query: 710   ccaacccatcagcgagctggtcatcgngagatgcagttataaatggaaatgctactggta 769
             ||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||
Sbjct: 10720 ccaacccatcagcgagctggtcatcggaggatgcagttataaatggaaatgctactggta 10779

                                                                         
Query: 770   gaagcgttatcccgccttacgagactattttaaaaaatgtcacanatgtcagactgaata 829
             |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 10780 gaagcgttatcccgccttacgagactattttaaaaaatgtcacaaatgtcagactgaata 10839

                                                                         
Query: 830   ggaccctaattgtcacaccaatgatttccggtttttgagagcatgtattgggtcgtgcct 889
             |||||||||||||||||||||||||| ||||||||  |||||||||| | ||||||| ||
Sbjct: 10840 ggaccctaattgtcacaccaatgattcccggttttgaagagcatgta-tcggtcgtggct 10898

                                                               
Query: 890   ataatcaaaggattcataggtgatgtcgactgcgaatctggacacaaaaa 939
             |||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 10899 ataatcaaagaattcataggtgatgtcgactgcg-atctggacacaaaaa 10947


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5049
Number of Sequences: 1807
Number of extensions: 5049
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 1
length of query: 943
length of database: 10,358,551
effective HSP length: 16
effective length of query: 927
effective length of database: 10,329,639
effective search space: 9575575353
effective search space used: 9575575353
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)