BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC49ZD11RM1.SCF screened BAC_end (943 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1696 1626 0.0 >3x_Contig1696 Length = 16725 Score = 1626 bits (820), Expect = 0.0 Identities = 875/890 (98%), Gaps = 3/890 (0%) Strand = Plus / Plus Query: 51 agaatactaccgatgggcacaaaaattcagaaccgttgcc-catgagcgtaaagaagaca 109 ||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 10060 agaatactagcgatgggcagaaaaattcagaaccgttgccacatgagcgtaaagaagaca 10119 Query: 110 aggtagccagaaatactgatgttaatgttacaggtggaaaaggacaaaataatgtgaaat 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10120 aggtagccagaaatactgatgttaatgttacaggtggaaaaggacaaaataatgtgaaat 10179 Query: 170 cagtacatcaaaatcccggaggacctcaaagggcgtcaccaagtccgtctcgttctaacc 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10180 cagtacatcaaaatcccggaggacctcaaagggcgtcaccaagtccgtctcgttctaacc 10239 Query: 230 gcaacaacaatcactcaataactgatacaaggcgtggaccgtcgcatgcggactatgcga 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10240 gcaacaacaatcactcaataactgatacaaggcgtggaccgtcgcatgcggactatgcga 10299 Query: 290 atcagagaaagcaggattcgagaagaggtccggctccgccagtgaatcagcatacctcta 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10300 atcagagaaagcaggattcgagaagaggtccggctccgccagtgaatcagcatacctcta 10359 Query: 350 gatatggaaaaagtcccagacaggataacagggaaaggcaaagtcgattccagagaaatg 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10360 gatatggaaaaagtcccagacaggataacagggaaaggcaaagtcgattccagagaaatg 10419 Query: 410 attcatcaatatctaaaccggcattcaacagtgacaacagcttccagcagaacagagggc 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10420 attcatcaatatctaaaccggcattcaacagtgacaacagcttccagcagaacagagggc 10479 Query: 470 atgaagtgcgcaacggtaggtttgacaacaaaaatagatggtctgatgcaagtaatgcct 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10480 atgaagtgcgcaacggtaggtttgacaacaaaaatagatggtctgatgcaagtaatgcct 10539 Query: 530 ctcattcgcggaataccaacttacaggtcaaaaacaatcaagcagatgattcagaaggcc 589 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10540 ctcattcgcggaataccaacttacaggtcaaaaacaatcaagcagatgattcagaaggcc 10599 Query: 590 ataactttcgtaaacctacagagtggaagaaagatctgtctcataacacacgtggacgtt 649 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10600 ataactttcgtaaacctacagagtggaagaaagatctgtctcataacacacgtggacgtt 10659 Query: 650 tcgaacctaacaaaaacaggtttgggcatgctcaagcggaaaggtataggacaaaaaccc 709 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10660 tcgaacctaacaaaaacaggtttgggcatgctcaagcggaaaggtataggacaaaaaccc 10719 Query: 710 ccaacccatcagcgagctggtcatcgngagatgcagttataaatggaaatgctactggta 769 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 10720 ccaacccatcagcgagctggtcatcggaggatgcagttataaatggaaatgctactggta 10779 Query: 770 gaagcgttatcccgccttacgagactattttaaaaaatgtcacanatgtcagactgaata 829 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 10780 gaagcgttatcccgccttacgagactattttaaaaaatgtcacaaatgtcagactgaata 10839 Query: 830 ggaccctaattgtcacaccaatgatttccggtttttgagagcatgtattgggtcgtgcct 889 |||||||||||||||||||||||||| |||||||| |||||||||| | ||||||| || Sbjct: 10840 ggaccctaattgtcacaccaatgattcccggttttgaagagcatgta-tcggtcgtggct 10898 Query: 890 ataatcaaaggattcataggtgatgtcgactgcgaatctggacacaaaaa 939 |||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 10899 ataatcaaagaattcataggtgatgtcgactgcg-atctggacacaaaaa 10947 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5049 Number of Sequences: 1807 Number of extensions: 5049 Number of successful extensions: 28 Number of sequences better than 1.0e-20: 1 length of query: 943 length of database: 10,358,551 effective HSP length: 16 effective length of query: 927 effective length of database: 10,329,639 effective search space: 9575575353 effective search space used: 9575575353 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)