BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC49ZE04RM1.SCF screened BAC_end (921 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1770 1653 0.0 >3x_Contig1770 Length = 29267 Score = 1653 bits (834), Expect = 0.0 Identities = 865/876 (98%) Strand = Plus / Minus Query: 46 taagctctagatgtttggctttaatttcacgtaggctgaattatcaacatacattgacct 105 |||||||| |||||||||||||||||||| || ||| |||||||||||| | |||||||| Sbjct: 10009 taagctcttgatgtttggctttaatttcatgttggcagaattatcaacaaaaattgacct 9950 Query: 106 taaatgggataaaatggtcgattaataggtcagcgaaccacttattgaaacgaaaagcca 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9949 taaatgggataaaatggtcgattaataggtcagcgaaccacttattgaaacgaaaagcca 9890 Query: 166 gtaaatgagatgagtgcatgctacacattgcatataaccttgttaattcgagtgaagtgg 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9889 gtaaatgagatgagtgcatgctacacattgcatataaccttgttaattcgagtgaagtgg 9830 Query: 226 ccaatctgggccatgatagtggtttatgttacatggattgcactgaaattacgttacccg 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9829 ccaatctgggccatgatagtggtttatgttacatggattgcactgaaattacgttacccg 9770 Query: 286 gtctctggattgatccctcaatatcaaaatctaaacaaagttgaagagctgatatgtaca 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9769 gtctctggattgatccctcaatatcaaaatctaaacaaagttgaagagctgatatgtaca 9710 Query: 346 tttcagtaaagagtgctcgaagtcataaaaagggtggttaaataggttcattcaactctg 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9709 tttcagtaaagagtgctcgaagtcataaaaagggtggttaaataggttcattcaactctg 9650 Query: 406 tgagccaatatttctgtcaataacagaattctaatctgattccagtcataatacacccat 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9649 tgagccaatatttctgtcaataacagaattctaatctgattccagtcataatacacccat 9590 Query: 466 ttttgcgaaatgcctagggttgctggaagctcaggaagcaagaaacaaggcaaggcaaag 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9589 ttttgcgaaatgcctagggttgctggaagctcaggaagcaagaaacaaggcaaggcaaag 9530 Query: 526 aaggatttcagcaatgaagatgatgcgtataacgctctatttggtggtgagtttggggca 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9529 aaggatttcagcaatgaagatgatgcgtataacgctctatttggtggtgagtttggggca 9470 Query: 586 ttagatattagtaattatactagtggtggcggcaatggtaagcaagatgaaacagagcat 645 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9469 ttagatattagtaattatactagtggtggcggcaatggtaagcaagatgaaacagagcat 9410 Query: 646 ctgccgaatgctattgattttgaagatgaagatgaattggcagatgaagaattaccggag 705 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9409 ctgccgaatgctattgattttgaagatgaagatgaattggcagatgaagaattaccggag 9350 Query: 706 gaagaagagccatcccattctccgaacaggcataatgaagggtcgtttcagcggagtctg 765 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9349 gaagaagagccatcccattctccgaacaggcataatgaagggtcgtttcagcggagtctg 9290 Query: 766 actgaagacgacgaatatatgactctgatggaccatggtgatgtgatgcatgaagttgac 825 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9289 actgaagacgacgaatatatgactctgatggaccatggtgatgtgatgcatgaagttgac 9230 Query: 826 gctgctggattngaagtacaaggtaataatgcattgntcatggagagcacatatcagtca 885 ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 9229 gctgctggatttgaagtacaaggtaataatgcattgttcatggagagcacatatcagtca 9170 Query: 886 tttggttcagaacaacacccattttacgaatatgat 921 |||||| |||||||||||| |||| ||||||||||| Sbjct: 9169 tttggtccagaacaacaccaatttaacgaatatgat 9134 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6579 Number of Sequences: 1807 Number of extensions: 6579 Number of successful extensions: 73 Number of sequences better than 1.0e-20: 1 length of query: 921 length of database: 10,358,551 effective HSP length: 16 effective length of query: 905 effective length of database: 10,329,639 effective search space: 9348323295 effective search space used: 9348323295 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)