BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC49ZE07RM1.SCF screened BAC_end (927 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1310 1515 0.0 >3x_Contig1310 Length = 7790 Score = 1515 bits (764), Expect = 0.0 Identities = 819/832 (98%), Gaps = 4/832 (0%) Strand = Plus / Plus Query: 47 ccgaagctgctactttcgatcca-gttctcgagtctatgattcttcatgagatcacctgg 105 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 3696 ccgaagctgctactttcgatccaagttctcgagtctatgattcttcatgagatcacctgg 3755 Query: 106 acagccacccaattgttacaatagacctcttgttggctgatcggttccaccttttctttc 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3756 acagccacccaattgttacaatagacctcttgttggctgatcggttccaccttttctttc 3815 Query: 166 ataacttgagaactctcatcttttaaagtgaaaaagtctaatattgagagatgagcctta 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3816 ataacttgagaactctcatcttttaaagtgaaaaagtctaatattgagagatgagcctta 3875 Query: 226 gcaactgagaaagtaactactcgtatccaaacaacacagtaaaaggatatacatagcact 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3876 gcaactgagaaagtaactactcgtatccaaacaacacagtaaaaggatatacatagcact 3935 Query: 286 ggaataatattgccaaaacagtcacaatgacgaaagaggatgctattgagtatgctataa 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3936 ggaataatattgccaaaacagtcacaatgacgaaagaggatgctattgagtatgctataa 3995 Query: 346 aggaattgcccaacattttgccactagatacagaacagatcaaagatctatgtgaacaga 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3996 aggaattgcccaacattttgccactagatacagaacagatcaaagatctatgtgaacaga 4055 Query: 406 cgataaaagaaggcaacaaccctgaacagatagcccaatccttttttgatcttttagggc 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4056 cgataaaagaaggcaacaaccctgaacagatagcccaatccttttttgatcttttagggc 4115 Query: 466 aagacgactcatcggtacatttcatatttgagttcaatgagaggctcatggaattgcccc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4116 aagacgactcatcggtacatttcatatttgagttcaatgagaggctcatggaattgcccc 4175 Query: 526 gtaaaacggctgtcaagaaaccaatagtgaacgaaacaaccaatactaaaaaagtgatat 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4176 gtaaaacggctgtcaagaaaccaatagtgaacgaaacaaccaatactaaaaaagtgatat 4235 Query: 586 ctccattgattaatactgtgaaaaccaatgattccagggccgagttcgccaacaagtcta 645 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4236 ctccattgattaatactgtgaaaaccaatgattccagggccgagttcgccaacaagtcta 4295 Query: 646 ttcaagcaacgaaaccgatattgaatagagaattaaaaaaggtaccgactgccaaggctg 705 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4296 ttcaagcaacgaaaccgatattgaatagagaattaaaaaaggtaccgactgccaaggctg 4355 Query: 706 tgaaaaaggattcggggaaagagagt-aagaagtcagattagatccattgaaggatatcg 764 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 4356 tgaaaaaggattcggggaaagagagtaaagaagtcagattagattcattgaaggatatcg 4415 Query: 765 atgatgtgttaaagatgtttgagatgaagtcagtctcttgggatttcggtcaatataaat 824 ||||||||||||||||||| ||||||| |||||||||| |||||| |||||||||||||| Sbjct: 4416 atgatgtgttaaagatgttggagatgaggtcagtctctggggattccggtcaatataaat 4475 Query: 825 gcaatttgccagggaccaagggcacccattattcaattctgcaccaaactgt 876 |||| |||||||||| ||| |||||||| ||||| || |||||||||||||| Sbjct: 4476 gcaa-ttgccagggaacaa-ggcacccaatattcgatcctgcaccaaactgt 4525 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6846 Number of Sequences: 1807 Number of extensions: 6846 Number of successful extensions: 45 Number of sequences better than 1.0e-20: 1 length of query: 927 length of database: 10,358,551 effective HSP length: 16 effective length of query: 911 effective length of database: 10,329,639 effective search space: 9410301129 effective search space used: 9410301129 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)