BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FJ0AC49ZE08RM1.SCF screened BAC_end
(939 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1807 1499 0.0
>3x_Contig1807
Length = 66587
Score = 1499 bits (756), Expect = 0.0
Identities = 866/894 (96%), Gaps = 7/894 (0%)
Strand = Plus / Plus
Query: 45 tatgaaagatacctcatgcatggccaatccaccgtgacaccaaaagaatttttttcagtg 104
|||||||| ||| |||| ||||| ||||||||||||||||||| ||||||||| |||||
Sbjct: 36158 tatgaaagttacatcattcatggt-aatccaccgtgacaccaaaggaattttttccagtg 36216
Query: 105 atgctaatgcactggacaatggttcctaaaaaatagggcgattaaggcatttcctttcca 164
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36217 atg-taatgcactggacaatggttcctaaaaaatagggcgattaaggcatttcctttcca 36275
Query: 165 gccttacaatggaatctgaagtaaaaagtttgtactccagatgttcaacgcaataaatgg 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36276 gccttacaatggaatctgaagtaaaaagtttgtactccagatgttcaacgcaataaatgg 36335
Query: 225 tcttaaatctttctgcaaaataaaactatgaattatgaacgaactgaaagcccttgttga 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36336 tcttaaatctttctgcaaaataaaactatgaattatgaacgaactgaaagcccttgttga 36395
Query: 285 agtcttgtgatttgaaaacatcaggtgctacttttattgccttcacattttgttcctcct 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36396 agtcttgtgatttgaaaacatcaggtgctacttttattgccttcacattttgttcctcct 36455
Query: 345 aagataaactagcgaaggaatggatatcccaaccagtatcattccaaatcccacaccaat 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36456 aagataaactagcgaaggaatggatatcccaaccagtatcattccaaatcccacaccaat 36515
Query: 405 tgggagcccaagcggtgttttgtaaagggctgcaagtactataggggcaactaatttacc 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36516 tgggagcccaagcggtgttttgtaaagggctgcaagtactataggggcaactaatttacc 36575
Query: 465 gacacctgcaatagctcctataaacggcattaattgaaccttgacttggggatctatata 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36576 gacacctgcaatagctcctataaacggcattaattgaaccttgacttggggatctatata 36635
Query: 525 catagagaataatgccggtacacttgatcccataaaattatagcctaacattgtgataga 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36636 catagagaataatgccggtacacttgatcccataaaattatagcctaacattgtgataga 36695
Query: 585 caatccagcggtgaaaaagataccagagtttgtttttggcaatttgtcattggacaatgc 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36696 caatccagcggtgaaaaagataccagagtttgtttttggcaatttgtcattggacaatgc 36755
Query: 645 ctcggaagctccaatcatgaaagcttggcctattaaagcgacgaataatgcanatatggt 704
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 36756 ctcggaagctccaatcatgaaagcttggcctattaaagcgacgaataatgcaaatatggt 36815
Query: 705 taaagaaacttgattcctgtgtaatgtgttaatgtcactttntttgttcagactctttct 764
||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 36816 taaagaaacttgattcctgtgtaatgtgttaatgtcacttt-tttgttcagactc-ttcc 36873
Query: 765 ttctcattcttatcgntgtcactcgtgtctgtttcatcttgcgtgctgggagtatttaac 824
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36874 ttctcaatcttatcgttgtcactcgtgtctgtttcatcttgcgtgctgggagtatttaac 36933
Query: 825 tttgcgattagttttacttagtccggggcaaaaaagcttccgcttacacctagaacggga 884
||||||| |||||||||| ||||||| |||||||||||||| ||||||||| |||| |
Sbjct: 36934 tttgcgaatagttttactaagtccggcgcaaaaaagcttccagctacacctagcacggca 36993
Query: 885 ggaacccataaatgccactcccctca-attctggttttcaacccacatttagag 937
||| |||||||||||||| |||||| |||||| ||| ||||||||||||||||
Sbjct: 36994 -gaaaccataaatgccact-ccctcatattctgttttccaacccacatttagag 37045
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6021
Number of Sequences: 1807
Number of extensions: 6021
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 939
length of database: 10,358,551
effective HSP length: 16
effective length of query: 923
effective length of database: 10,329,639
effective search space: 9534256797
effective search space used: 9534256797
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)