BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC49ZF01FM1.SCF screened BAC_end
         (924 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig806                                                         1409   0.0  

>3x_Contig806 
          Length = 2480

 Score = 1409 bits (711), Expect = 0.0
 Identities = 770/786 (97%), Gaps = 3/786 (0%)
 Strand = Plus / Plus

                                                                        
Query: 86   cgaatttggtcaaagctcttctcaaagctctggtcttcttggctctcaagtcctttggtt 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1327 cgaatttggtcaaagctcttctcaaagctctggtcttcttggctctcaagtcctttggtt 1386

                                                                        
Query: 146  ggtacttcttacccttgtacaattctctgacagcttgtctttggttttgagagataacag 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1387 ggtacttcttacccttgtacaattctctgacagcttgtctttggttttgagagataacag 1446

                                                                        
Query: 206  tcaagacacgagcaatgttctttctgacagtgttgatttttggcaaagatggtctggaca 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1447 tcaagacacgagcaatgttctttctgacagtgttgatttttggcaaagatggtctggaca 1506

                                                                        
Query: 266  atttttgaaccttcaattcggccaattccttcttcaattcaaccaattgttgttccaatt 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1507 atttttgaaccttcaattcggccaattccttcttcaattcaaccaattgttgttccaatt 1566

                                                                        
Query: 326  ggtccttggacttggttctcaattcgtaagctttaataccggcctaaataaaaatgccat 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1567 ggtccttggacttggttctcaattcgtaagctttaataccggcctaaataaaaatgccat 1626

                                                                        
Query: 386  cgaaatgatgtctattgttagtaaaaattgttcatattaaaaccaataccacactactca 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1627 cgaaatgatgtctattgttagtaaaaattgttcatattaaaaccaataccacactactca 1686

                                                                        
Query: 446  tatagttgtcctgtttcagaactgcagtccaattatttcggacatctccttaggagatgt 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1687 tatagttgtcctgtttcagaactgcagtccaattatttcggacatctccttaggagatgt 1746

                                                                        
Query: 506  agaagagcataaatatgcaggatagaatattcaacgaaaggtgttccgcagaagctttta 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1747 agaagagcataaatatgcaggatagaatattcaacgaaaggtgttccgcagaagctttta 1806

                                                                        
Query: 566  attcaggtttccaaattcaaaaggaaattatggtatcttaagcctgttatcatagttgtt 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1807 attcaggtttccaaattcaaaaggaaattatggtatcttaagcctgttatcatagttgtt 1866

                                                                        
Query: 626  cttgtctttctcctctacactctagatgtcaaacgtttcctatacgtccatcgaaaaata 685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1867 cttgtctttctcctctacactctagatgtcaaacgtttcctatacgtccatcgaaaaata 1926

                                                                        
Query: 686  actgtcgttagaccatctatcttgccacanatttggttattgacttgggcattacaatac 745
            ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 1927 actgtcgttagaccatctatcttgccacaaatttggttattgacttgtgcattacaatac 1986

                                                                        
Query: 746  cgattattgttg-agggttttctcgccgaaccgtttgcttcaatattgtttgtaggcttt 804
            ||| || ||||| || |||| |||||||||| |||||||  ||||||||||||||||| |
Sbjct: 1987 cga-taatgttgaagagtttcctcgccgaacggtttgctcaaatattgtttgtaggctat 2045

                                                                        
Query: 805  ctatccatgcatttttcaaagtcattcatttttcttcgttatatgctctatttcttgcag 864
            ||||||||||||| |  |||||||| || |||||||||||||||||||||||||||||||
Sbjct: 2046 ctatccatgcattctcaaaagtcatcca-ttttcttcgttatatgctctatttcttgcag 2104

                  
Query: 865  ttcgtt 870
            ||||||
Sbjct: 2105 ttcgtt 2110


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7232
Number of Sequences: 1807
Number of extensions: 7232
Number of successful extensions: 60
Number of sequences better than 1.0e-20: 1
length of query: 924
length of database: 10,358,551
effective HSP length: 16
effective length of query: 908
effective length of database: 10,329,639
effective search space: 9379312212
effective search space used: 9379312212
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)