BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC49ZF01FM1.SCF screened BAC_end (924 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig806 1409 0.0 >3x_Contig806 Length = 2480 Score = 1409 bits (711), Expect = 0.0 Identities = 770/786 (97%), Gaps = 3/786 (0%) Strand = Plus / Plus Query: 86 cgaatttggtcaaagctcttctcaaagctctggtcttcttggctctcaagtcctttggtt 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1327 cgaatttggtcaaagctcttctcaaagctctggtcttcttggctctcaagtcctttggtt 1386 Query: 146 ggtacttcttacccttgtacaattctctgacagcttgtctttggttttgagagataacag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1387 ggtacttcttacccttgtacaattctctgacagcttgtctttggttttgagagataacag 1446 Query: 206 tcaagacacgagcaatgttctttctgacagtgttgatttttggcaaagatggtctggaca 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1447 tcaagacacgagcaatgttctttctgacagtgttgatttttggcaaagatggtctggaca 1506 Query: 266 atttttgaaccttcaattcggccaattccttcttcaattcaaccaattgttgttccaatt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1507 atttttgaaccttcaattcggccaattccttcttcaattcaaccaattgttgttccaatt 1566 Query: 326 ggtccttggacttggttctcaattcgtaagctttaataccggcctaaataaaaatgccat 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1567 ggtccttggacttggttctcaattcgtaagctttaataccggcctaaataaaaatgccat 1626 Query: 386 cgaaatgatgtctattgttagtaaaaattgttcatattaaaaccaataccacactactca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1627 cgaaatgatgtctattgttagtaaaaattgttcatattaaaaccaataccacactactca 1686 Query: 446 tatagttgtcctgtttcagaactgcagtccaattatttcggacatctccttaggagatgt 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1687 tatagttgtcctgtttcagaactgcagtccaattatttcggacatctccttaggagatgt 1746 Query: 506 agaagagcataaatatgcaggatagaatattcaacgaaaggtgttccgcagaagctttta 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1747 agaagagcataaatatgcaggatagaatattcaacgaaaggtgttccgcagaagctttta 1806 Query: 566 attcaggtttccaaattcaaaaggaaattatggtatcttaagcctgttatcatagttgtt 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1807 attcaggtttccaaattcaaaaggaaattatggtatcttaagcctgttatcatagttgtt 1866 Query: 626 cttgtctttctcctctacactctagatgtcaaacgtttcctatacgtccatcgaaaaata 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1867 cttgtctttctcctctacactctagatgtcaaacgtttcctatacgtccatcgaaaaata 1926 Query: 686 actgtcgttagaccatctatcttgccacanatttggttattgacttgggcattacaatac 745 ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 1927 actgtcgttagaccatctatcttgccacaaatttggttattgacttgtgcattacaatac 1986 Query: 746 cgattattgttg-agggttttctcgccgaaccgtttgcttcaatattgtttgtaggcttt 804 ||| || ||||| || |||| |||||||||| ||||||| ||||||||||||||||| | Sbjct: 1987 cga-taatgttgaagagtttcctcgccgaacggtttgctcaaatattgtttgtaggctat 2045 Query: 805 ctatccatgcatttttcaaagtcattcatttttcttcgttatatgctctatttcttgcag 864 ||||||||||||| | |||||||| || ||||||||||||||||||||||||||||||| Sbjct: 2046 ctatccatgcattctcaaaagtcatcca-ttttcttcgttatatgctctatttcttgcag 2104 Query: 865 ttcgtt 870 |||||| Sbjct: 2105 ttcgtt 2110 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7232 Number of Sequences: 1807 Number of extensions: 7232 Number of successful extensions: 60 Number of sequences better than 1.0e-20: 1 length of query: 924 length of database: 10,358,551 effective HSP length: 16 effective length of query: 908 effective length of database: 10,329,639 effective search space: 9379312212 effective search space used: 9379312212 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)