BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC49ZF03FM1.SCF screened BAC_end
         (945 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1299                                                        1405   0.0  

>3x_Contig1299 
          Length = 7525

 Score = 1405 bits (709), Expect = 0.0
 Identities = 766/781 (98%), Gaps = 3/781 (0%)
 Strand = Plus / Plus

                                                                        
Query: 86   tttcataacagctagatagttggtaacgaatgagaaacactgttgagtgacagaatcgta 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6716 tttcataacagctagatagttggtaacgaatgagaaacactgttgagtgacagaatcgta 6775

                                                                        
Query: 146  ttcatgggccataaatttcaagaccagtggtgacacaacgttaatgatttgttcatctgc 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6776 ttcatgggccataaatttcaagaccagtggtgacacaacgttaatgatttgttcatctgc 6835

                                                                        
Query: 206  cgcagatgaaactgactgtaactcttgtgagtcattacattgatccataaccatggataa 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6836 cgcagatgaaactgactgtaactcttgtgagtcattacattgatccataaccatggataa 6895

                                                                        
Query: 266  ctcaagagcaacaccattggtcaattttgccatctgttccaaaacgtcaaggtcttcagc 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6896 ctcaagagcaacaccattggtcaattttgccatctgttccaaaacgtcaaggtcttcagc 6955

                                                                        
Query: 326  ggaacctgtcgccactactctatcggtcaagttgagcatgcttagcaattgcaacttgtc 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6956 ggaacctgtcgccactactctatcggtcaagttgagcatgcttagcaattgcaacttgtc 7015

                                                                        
Query: 386  cgcaggtttcatcttcttcgagatgatttcacagagacattgcccgcatgcaagcttcgt 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7016 cgcaggtttcatcttcttcgagatgatttcacagagacattgcccgcatgcaagcttcgt 7075

                                                                        
Query: 446  ttgtgggaatttcaaatattcatagatagtaccgatgtatgactgttgaactatgaggtt 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7076 ttgtgggaatttcaaatattcatagatagtaccgatgtatgactgttgaactatgaggtt 7135

                                                                        
Query: 506  gatatcgatccaagaaatgtacgatccaacacactgaagcactaatgacgctagtacggg 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7136 gatatcgatccaagaaatgtacgatccaacacactgaagcactaatgacgctagtacggg 7195

                                                                        
Query: 566  caactgttgacaattcaaaagtgcagaaaaccaaatattactcaacaactccacatcctg 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7196 caactgttgacaattcaaaagtgcagaaaaccaaatattactcaacaactccacatcctg 7255

                                                                        
Query: 626  aacacgcatatagtccttcaactcgttattcttgagttgcacctctttcgatctgacaaa 685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7256 aacacgcatatagtccttcaactcgttattcttgagttgcacctctttcgatctgacaaa 7315

                                                                        
Query: 686  tgcttgatcaccgatctccgtattgatagatgcacatattctaaag-aaagattcaattc 744
            |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |
Sbjct: 7316 tgcttgatcaccgatctccgtattgatagatgcacatattctaaagaaaagatccaatcc 7375

                                                                        
Query: 745  aatcgcattggactcaacaccggtactctttagaat-cctttacgatgctattccaacta 803
            |||||||||| ||||||||||||||||| ||||||| |||| ||||||||||||||||||
Sbjct: 7376 aatcgcattgaactcaacaccggtactc-ttagaatcccttaacgatgctattccaacta 7434

                                                                        
Query: 804  gttgaattaaatccacaaagaatcttggacccatattattattaaccctttcgtacatgt 863
            |||||||||||||||||||||| || |  | ||||||||||||||||  | |||||||||
Sbjct: 7435 gttgaattaaatccacaaagaaactcgaccacatattattattaacctctccgtacatgt 7494

             
Query: 864  t 864
            |
Sbjct: 7495 t 7495


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6719
Number of Sequences: 1807
Number of extensions: 6719
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 945
length of database: 10,358,551
effective HSP length: 16
effective length of query: 929
effective length of database: 10,329,639
effective search space: 9596234631
effective search space used: 9596234631
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)