BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC49ZF06RM1.SCF screened BAC_end (954 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1771 1396 0.0 3x_Contig812 113 7e-25 >3x_Contig1771 Length = 25932 Score = 1396 bits (704), Expect = 0.0 Identities = 780/800 (97%), Gaps = 4/800 (0%) Strand = Plus / Plus Query: 132 gccccagaatctgacttcacttgttcgaattccaaggttttaccatcatatttgaggaga 191 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 5 gccccagaatctgacttcacttgttcgaattccaaggtttacccatcatatttgaggaga 64 Query: 192 tcggcatttgcatcgaatgagctgatatttaaagtttgacataaatcaactttagaagag 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65 tcggcatttgcatcgaatgagctgatatttaaagtttgacataaatcaactttagaagag 124 Query: 252 tctccaccgctaatagctttttcaaaattctccttctgtatgactttatcacagattgct 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 tctccaccgctaatagctttttcaaaattctccttctgtatgactttatcacagattgct 184 Query: 312 aatgcattttttgcagtgagctcgttaggcttgaatttcaacacaatgatcaagtccttc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185 aatgcattttttgcagtgagctcgttaggcttgaatttcaacacaatgatcaagtccttc 244 Query: 372 cttgcctttctaaactctagtagcccaatgtaagacatagctctgcggtgataggctttc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 245 cttgcctttctaaactctagtagcccaatgtaagacatagctctgcggtgataggctttc 304 Query: 432 aaattgttattatccaattcaattgcacgtttagcatcgtctaaagaactttggaagtta 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 305 aaattgttattatccaattcaattgcacgtttagcatcgtctaaagaactttggaagtta 364 Query: 492 tccaactttaggttggtgaacgcacggtttgaatataggatcgtattctcgggatcatgc 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 tccaactttaggttggtgaacgcacggtttgaatataggatcgtattctcgggatcatgc 424 Query: 552 tcgatggcttttgtataatactcagctgcctttgcgtacagtttctccttcacgaacttg 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 425 tcgatggcttttgtataatactcagctgcctttgcgtacagtttctccttcacgaacttg 484 Query: 612 ttaccttcattctttagctctaaggctttctctggattacagggcttcacttcctcagtc 671 |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 485 ttaccttcattcttcagctctaaggctttctctggattacaggctttcacttcctcagtc 544 Query: 672 atttattcaatagtagtgggaaaaaagcagccaactggtatggtatgtgccttttagtcc 731 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 545 atttattcaatagtagtggtaaaaaagcagccaactggtatggtatgtgcctttaagtcc 604 Query: 732 tcaagaccgataaacggagcccattttaaaagttttttctgatgtgagtcctttctcttc 791 ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| Sbjct: 605 tcaagaccgataaacggagcccatttt-aaagttttttctgatgtgagt-ctttctcttc 662 Query: 792 ttgatgttgacttggtgaattttttcatctcgatgtttcaatattaccgcgatgtgatga 851 |||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||| Sbjct: 663 ttgatgttgacttgttgatttttttcatctcgatgtttcaatattacggcgatgtgatga 722 Query: 852 gatgttatgtgaaagagatttgccaaagtgaaag-aagtactcaatttggaattgaacta 910 ||||| ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct: 723 gatgtaatgtg-aagagatttgcgaaagtgaaagaaagtactcaatttggaattgaacta 781 Query: 911 ccttaattttttacttgaaa 930 | | | |||| ||||||||| Sbjct: 782 cttaagttttctacttgaaa 801 >3x_Contig812 Length = 2325 Score = 113 bits (57), Expect = 7e-25 Identities = 101/109 (92%), Gaps = 5/109 (4%) Strand = Plus / Plus Query: 48 tttaccttatagcgaaaatctcattaatcatataagaaatgaatgtcctcggttcatatt 107 |||||||| ||| ||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 2198 tttaccttctag-gaaaatctcattaatcatataagaaatgaat-tcct-ggttcatatt 2254 Query: 108 ggttaacatctgacaccagcattggccccagaatctgacttcacttgtt 156 | ||||| |||||||||||||||||||||||||||||| |||| ||||| Sbjct: 2255 g-ttaac-tctgacaccagcattggccccagaatctgaattcaattgtt 2301 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7528 Number of Sequences: 1807 Number of extensions: 7528 Number of successful extensions: 64 Number of sequences better than 1.0e-20: 2 length of query: 954 length of database: 10,358,551 effective HSP length: 16 effective length of query: 938 effective length of database: 10,329,639 effective search space: 9689201382 effective search space used: 9689201382 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)