BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC49ZF07FM1.SCF screened BAC_end (935 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1572 1328 0.0 >3x_Contig1572 Length = 12810 Score = 1328 bits (670), Expect = 0.0 Identities = 729/746 (97%), Gaps = 2/746 (0%) Strand = Plus / Plus Query: 90 atggtaagatacctatcgatgtgaacgaaatgaaaatagatctgatgtccatttcctcac 149 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5000 atggtaagatacctatcgatgtgaacgaaatgaaaatagatctgatgtccatttcctcac 5059 Query: 150 acaaaatttatggtccaaagggaattggtgccatttacgttagaagaaagccaagagtca 209 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5060 acaaaatttatggtccaaagggaattggtgccatttacgttagaagaaagccaagagtca 5119 Query: 210 gattagatccttttatttccggtggtggtcaagaaagaggtttacgttctggtacattgg 269 |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5120 gattagatccgcttatctccggtggtggtcaagaaagaggtttacgttctggtacattgg 5179 Query: 270 ctccacctttggttgccggcttcggggaagcagcaagattgatgatgaaagaatacgaga 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5180 ctccacctttggttgccggcttcggggaagcagcaagattgatgatgaaagaatacgaga 5239 Query: 330 acgactcaaatcacattaaaagattatctgacaaattaatgaacgctttgttatctattg 389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5240 acgactcaaatcacattaaaagattatctgacaaattaatgaacgctttgttatctattg 5299 Query: 390 accatacaatcttaaacggttctgctgaccatcgttacccaggttgtgttaacatttcat 449 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5300 accatacaatcttaaacggttctgctgaccatcgttacccaggttgtgttaacatttcat 5359 Query: 450 tcgcatatgtcgaaggtgaatccttattgatggctcttagagatattgctttgagttctg 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5360 tcgcatatgtcgaaggtgaatccttattgatggctcttagagatattgctttgagttctg 5419 Query: 510 gttctgcttgtacttcggcatctttagaaccatcttatgtgttgcatgcattgggtaaag 569 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5420 gttctgcttgtacttcggcatctttagaaccatcttatgtgttgcatgcattgggtaaag 5479 Query: 570 atgatgctttagcacactctttcatcagattcggtattggtagattcaccactgatgaag 629 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 5480 atgatgctttagcacactcttccatcagattcggtattggtagattcaccactgatgaag 5539 Query: 630 aaattgattacgttatcaaggctatcacggaaagagttgatttcctaagagagttgtccc 689 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5540 aaattgattacgttatcaaggctatcacggaaagagttgatttcctaagagagttgtccc 5599 Query: 690 cattatggggagatggtcaaggaaggtattgacttgaactccatcgaatggtcagggtat 749 |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 5600 cattat-gggagatggtcaaggaaggtattgacttgaactccatcgaatggtca-ggtca 5657 Query: 750 ttaagctggaaccaaagtgaactatatcatagattcattattttattttcttgctagaag 809 |||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 5658 ttaagctggaacaaaagtgatctatatcatagattcatcattttattttcttgctagagt 5717 Query: 810 gcatacccaaattttatttggtttct 835 ||||||| || ||||| |||||||| Sbjct: 5718 gcataccaaatctttatctggtttct 5743 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7974 Number of Sequences: 1807 Number of extensions: 7974 Number of successful extensions: 77 Number of sequences better than 1.0e-20: 1 length of query: 935 length of database: 10,358,551 effective HSP length: 16 effective length of query: 919 effective length of database: 10,329,639 effective search space: 9492938241 effective search space used: 9492938241 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)