BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC49ZF10RM1.SCF screened BAC_end
         (935 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1519                                                        1378   0.0  

>3x_Contig1519 
          Length = 9351

 Score = 1378 bits (695), Expect = 0.0
 Identities = 756/771 (98%), Gaps = 4/771 (0%)
 Strand = Plus / Minus

                                                                        
Query: 108  cgaatatggtaaaacccacatatgacaactataatgttccttctccatcacatatctccc 167
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 8655 cgaatatggtaaaacccacatatgacaactataatgttccttctccatcacat-tctccc 8597

                                                                        
Query: 168  acaagagatagatattatcacggtggtgcataccagaacgtccccacgtcaaatgagaat 227
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8596 acaagagatagatattatcacggtggtgcataccagaacgtccccacgtcaaatgagaat 8537

                                                                        
Query: 228  ccgttctaccaaaacacagcatattatccggaagaaacaactaggcctcaagtttatcca 287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8536 ccgttctaccaaaacacagcatattatccggaagaaacaactaggcctcaagtttatcca 8477

                                                                        
Query: 288  cggtatagctagatgaatcaacttagttcaggaaacaaagtaacggtatcacaccagtgc 347
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8476 cggtatagctagatgaatcaacttagttcaggaaacaaagtaacggtatcacaccagtgc 8417

                                                                        
Query: 348  gaaccgtcactttgtcactcggagtggtcgattcgaattttattttggttatgtacgttt 407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8416 gaaccgtcactttgtcactcggagtggtcgattcgaattttattttggttatgtacgttt 8357

                                                                        
Query: 408  ttatatgttacacttttcggtattttgtatgaatatagtctgtaaggcaagtttatttga 467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8356 ttatatgttacacttttcggtattttgtatgaatatagtctgtaaggcaagtttatttga 8297

                                                                        
Query: 468  cgttttcagcaatggtttctcttattgaacagatagatgcctgtaaattttcatgagcgg 527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8296 cgttttcagcaatggtttctcttattgaacagatagatgcctgtaaattttcatgagcgg 8237

                                                                        
Query: 528  attgattcaatgaccttaattgaatcttcaatcccttttcaataatatcgtcataaaggg 587
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8236 attgattcaatgaccttaattgaatcttcaatcccttttcaataatatcgtcataaaggg 8177

                                                                        
Query: 588  cagaggattgttctaccacatctttaggtaaaacgtctcttttgattgcggatagagcat 647
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8176 cagaggattgttctaccacatctttaggtaaaacgtctcttttgattgcggatagagcat 8117

                                                                        
Query: 648  tgttccacgtgtttggtgttaattgacttgtaacagtgcctgcaagaatccatggaagag 707
            ||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||
Sbjct: 8116 tgttccacgtgtttggtgttaattgactgtaaacagtgcctgcaagaatccatggaagag 8057

                                                                        
Query: 708  tcaacctaactggcagatttgttagaagtttagagaattgtgagggcgttctcttcagaa 767
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 8056 tcaacctaactggcagatttgttagaagtttagagaattgtgagggcgttctcttcagta 7997

                                                                        
Query: 768  tacctgatttatcactattccaaggagattggaaaccccagcttcttttggcttgatacc 827
            ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 7996 tacctgatttatcactattccaaggagattggaaaccccagtttctttt-gcttgatacc 7938

                                                               
Query: 828  acggaaaccgagaaacacgctccccaaagc-aatacacttgccatgacaat 877
            |||||| |  |||| |||||| |||||||| |||||||||||  |||||||
Sbjct: 7937 acggaaccgaagaaccacgct-cccaaagcaaatacacttgcagtgacaat 7888


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5847
Number of Sequences: 1807
Number of extensions: 5847
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 935
length of database: 10,358,551
effective HSP length: 16
effective length of query: 919
effective length of database: 10,329,639
effective search space: 9492938241
effective search space used: 9492938241
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)