BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC49ZF10RM1.SCF screened BAC_end (935 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1519 1378 0.0 >3x_Contig1519 Length = 9351 Score = 1378 bits (695), Expect = 0.0 Identities = 756/771 (98%), Gaps = 4/771 (0%) Strand = Plus / Minus Query: 108 cgaatatggtaaaacccacatatgacaactataatgttccttctccatcacatatctccc 167 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 8655 cgaatatggtaaaacccacatatgacaactataatgttccttctccatcacat-tctccc 8597 Query: 168 acaagagatagatattatcacggtggtgcataccagaacgtccccacgtcaaatgagaat 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8596 acaagagatagatattatcacggtggtgcataccagaacgtccccacgtcaaatgagaat 8537 Query: 228 ccgttctaccaaaacacagcatattatccggaagaaacaactaggcctcaagtttatcca 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8536 ccgttctaccaaaacacagcatattatccggaagaaacaactaggcctcaagtttatcca 8477 Query: 288 cggtatagctagatgaatcaacttagttcaggaaacaaagtaacggtatcacaccagtgc 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8476 cggtatagctagatgaatcaacttagttcaggaaacaaagtaacggtatcacaccagtgc 8417 Query: 348 gaaccgtcactttgtcactcggagtggtcgattcgaattttattttggttatgtacgttt 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8416 gaaccgtcactttgtcactcggagtggtcgattcgaattttattttggttatgtacgttt 8357 Query: 408 ttatatgttacacttttcggtattttgtatgaatatagtctgtaaggcaagtttatttga 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8356 ttatatgttacacttttcggtattttgtatgaatatagtctgtaaggcaagtttatttga 8297 Query: 468 cgttttcagcaatggtttctcttattgaacagatagatgcctgtaaattttcatgagcgg 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8296 cgttttcagcaatggtttctcttattgaacagatagatgcctgtaaattttcatgagcgg 8237 Query: 528 attgattcaatgaccttaattgaatcttcaatcccttttcaataatatcgtcataaaggg 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8236 attgattcaatgaccttaattgaatcttcaatcccttttcaataatatcgtcataaaggg 8177 Query: 588 cagaggattgttctaccacatctttaggtaaaacgtctcttttgattgcggatagagcat 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8176 cagaggattgttctaccacatctttaggtaaaacgtctcttttgattgcggatagagcat 8117 Query: 648 tgttccacgtgtttggtgttaattgacttgtaacagtgcctgcaagaatccatggaagag 707 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 8116 tgttccacgtgtttggtgttaattgactgtaaacagtgcctgcaagaatccatggaagag 8057 Query: 708 tcaacctaactggcagatttgttagaagtttagagaattgtgagggcgttctcttcagaa 767 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 8056 tcaacctaactggcagatttgttagaagtttagagaattgtgagggcgttctcttcagta 7997 Query: 768 tacctgatttatcactattccaaggagattggaaaccccagcttcttttggcttgatacc 827 ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 7996 tacctgatttatcactattccaaggagattggaaaccccagtttctttt-gcttgatacc 7938 Query: 828 acggaaaccgagaaacacgctccccaaagc-aatacacttgccatgacaat 877 |||||| | |||| |||||| |||||||| ||||||||||| ||||||| Sbjct: 7937 acggaaccgaagaaccacgct-cccaaagcaaatacacttgcagtgacaat 7888 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5847 Number of Sequences: 1807 Number of extensions: 5847 Number of successful extensions: 41 Number of sequences better than 1.0e-20: 1 length of query: 935 length of database: 10,358,551 effective HSP length: 16 effective length of query: 919 effective length of database: 10,329,639 effective search space: 9492938241 effective search space used: 9492938241 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)