BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC49ZG01FM1.SCF screened BAC_end (927 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1770 1366 0.0 >3x_Contig1770 Length = 29267 Score = 1366 bits (689), Expect = 0.0 Identities = 719/725 (99%), Gaps = 3/725 (0%) Strand = Plus / Minus Query: 86 taagctcttgatgtttggctttaatttcatgttggcagaattatcaacaaaaattgacct 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10009 taagctcttgatgtttggctttaatttcatgttggcagaattatcaacaaaaattgacct 9950 Query: 146 taaatgggataaaatggtcgattaataggtcagcgaaccacttattgaaacgaaaagcca 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9949 taaatgggataaaatggtcgattaataggtcagcgaaccacttattgaaacgaaaagcca 9890 Query: 206 gtaaatgagatgagtgcatgctacacattgcatataaccttgttaattcgagtgaagtgg 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9889 gtaaatgagatgagtgcatgctacacattgcatataaccttgttaattcgagtgaagtgg 9830 Query: 266 ccaatctgggccatgatagtggtttatgttacatggattgcactgaaattacgttacccg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9829 ccaatctgggccatgatagtggtttatgttacatggattgcactgaaattacgttacccg 9770 Query: 326 gtctctggattgatccctcaatatcaaaatctaaacaaagttgaagagctgatatgtaca 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9769 gtctctggattgatccctcaatatcaaaatctaaacaaagttgaagagctgatatgtaca 9710 Query: 386 tttcagtaaagagtgctcgaagtcataaaaagggtggttaaataggttcattcaactctg 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9709 tttcagtaaagagtgctcgaagtcataaaaagggtggttaaataggttcattcaactctg 9650 Query: 446 tgagccaatatttctgtcaataacagaattctaatctgattccagtcataatacacccat 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9649 tgagccaatatttctgtcaataacagaattctaatctgattccagtcataatacacccat 9590 Query: 506 ttttgcgaaatgcctagggttgctggaagctcaggaagcaagaaacaaggcaaggcaaag 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9589 ttttgcgaaatgcctagggttgctggaagctcaggaagcaagaaacaaggcaaggcaaag 9530 Query: 566 aaggatttcagcaatgaagatgatgcgtataacgctctatttggtggtgagtttggggca 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9529 aaggatttcagcaatgaagatgatgcgtataacgctctatttggtggtgagtttggggca 9470 Query: 626 ttagatattattaattatactagtggtggcggcaatggtaagcaagatgaaacagagcat 685 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9469 ttagatattagtaattatactagtggtggcggcaatggtaagcaagatgaaacagagcat 9410 Query: 686 ctgccgaatgctattgattttgaagatgaagatgaattggcagatgaagaattaccgga- 744 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9409 ctgccgaatgctattgattttgaagatgaagatgaattggcagatgaagaattaccggag 9350 Query: 745 gaagaagagccat-ccattctccgaacaggcataatgaaaggtcgtttcatcgggagtct 803 ||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||||| Sbjct: 9349 gaagaagagccatcccattctccgaacaggcataatgaagggtcgtttcagc-ggagtct 9291 Query: 804 gactg 808 ||||| Sbjct: 9290 gactg 9286 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7497 Number of Sequences: 1807 Number of extensions: 7497 Number of successful extensions: 89 Number of sequences better than 1.0e-20: 1 length of query: 927 length of database: 10,358,551 effective HSP length: 16 effective length of query: 911 effective length of database: 10,329,639 effective search space: 9410301129 effective search space used: 9410301129 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)