BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC49ZG02RM1.SCF screened BAC_end (946 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1687 1495 0.0 >3x_Contig1687 Length = 12800 Score = 1495 bits (754), Expect = 0.0 Identities = 871/898 (96%), Gaps = 9/898 (1%) Strand = Plus / Minus Query: 50 tgagggaatcatcccatgagggcaacgaaaagtcagacaaagagatcacataaagatgga 109 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 4103 tgagggaatcatcccatgagggcaa-gaaaagtaagacaaagagatcacataaagatgga 4045 Query: 110 aaagatgagtacacagttgtgtcttggaaaagaagttgaaatatctagaaaaattacgtt 169 |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 4044 aaagatgagtacac-gttgt-tcttggaaaagaagttgaaatatctagaaaaatta-gtt 3988 Query: 170 gacatgaaaccagatacgaactcgtataaagagaaactcagcaaatacaagaaggttgct 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3987 gacatgaaaccagatacgaactcgtataaagagaaactcagcaaatacaagaaggttgct 3928 Query: 230 catctatttggacaacggagaacctgatcaggatgatataacaactgtgcttcctcccac 289 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3927 catct-tttggacaacggagaacctgatcaggatgatataacaactgtgcttcctcccac 3869 Query: 290 ggcggcacaacaaactgcaccttctaatacacttgctgcttcgctatcacagcagccgaa 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3868 ggcggcacaacaaactgcaccttctaatacacttgctgcttcgctatcacagcagccgaa 3809 Query: 350 tggggcagcaggggtagctcaggatcaacagataacgaggattaggtcacctatactacc 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3808 tggggcagcaggggtagctcaggatcaacagataacgaggattaggtcacctatactacc 3749 Query: 410 tgcggctccgaaaactaagtttttacctgtacatcaacagtctcaaaatcaaccacaacg 469 | || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 3748 tccgcctccgaaaactaagtttttacctctacatcaacagtctcaaaatcaaccacaacg 3689 Query: 470 ttctggcatgattaagcctgctcattctcatgaacgagcattggaatccttagcatctga 529 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 3688 ttctggcatgattaagcctcctcattctcatgaacgagcattggaatccttagcatctga 3629 Query: 530 ttctctcgaatcaatcgattattcacgttgcattttcgcaaaatacaacttgaaagagtt 589 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3628 ttctctcgaatcaatcgattattcacgttgcattttcgcaaaatacaacttgaaagagtt 3569 Query: 590 cttgtcatatgatccagctttcgaatttgatgaacaattgagtagagcgtttttggacac 649 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3568 cttgtcatatgatccagctttcgaatttgatgaacaattgagtagagcgtttttggacac 3509 Query: 650 ctactttacaagacttcaattcaaatatccacttctagatgaacaagagcattacacttt 709 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 3508 ctactttacaagacttcaattcaaatatccacttctagatgaacaagagatttacacttt 3449 Query: 710 ccacaatgattatgttaataataatgttcactcatattcaatcaatgaattccatttctc 769 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3448 ccacaatgattatattaataataatgttcactcatattcaatcaatgaattccatttctc 3389 Query: 770 ctgtggtagaatgtggttagttttcagcatttgagcccatttacacaagaccactggaaa 829 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3388 ctgtggtagaatgtggttagttttcagcatttcagcccatttacacaagaccactggaaa 3329 Query: 830 ataccatgggttgcctgcaaaaagatatttctcacctgcgattcgtcatattcacc-aat 888 |||||| ||||||||| |||| |||||||||||| |||| |||||||||| ||||| ||| Sbjct: 3328 ataccaggggttgcctccaaatagatatttctcaactgcaattcgtcata-tcaccaaat 3270 Query: 889 gtggaaacaattttgacttttgtttcaaaagattgaaggtctcaatttgctcatcttg 946 |||| ||||| ||||||||||| ||||| ||||||||| ||||| ||||||||||||| Sbjct: 3269 gtgg-aacaaatttgacttttg-ttcaacagattgaagttctcattttgctcatcttg 3214 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7240 Number of Sequences: 1807 Number of extensions: 7240 Number of successful extensions: 63 Number of sequences better than 1.0e-20: 1 length of query: 946 length of database: 10,358,551 effective HSP length: 16 effective length of query: 930 effective length of database: 10,329,639 effective search space: 9606564270 effective search space used: 9606564270 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)