BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC49ZG03RM1.SCF screened BAC_end (937 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1709 1562 0.0 >3x_Contig1709 Length = 16948 Score = 1562 bits (788), Expect = 0.0 Identities = 868/887 (97%), Gaps = 6/887 (0%) Strand = Plus / Minus Query: 48 cagcagccaacaatttccagttggactcagggtcattaggatcgacaaagcctgttggat 107 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8820 cagcagccaagaatttccagttggactcagggtcattaggatcgacaaagcctgttggat 8761 Query: 108 gaacctgaatttggtccatatcaattaatttagcacctagcctttctagtaaaacctgcc 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8760 gaacctgaatttggtccatatcaattaatttagcacctagcctttctagtaaaacctgcc 8701 Query: 168 cttcacccaaagtctgatcaccgtttgtggttggtaaatcgactagatgtggggcatatt 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8700 cttcacccaaagtctgatcaccgtttgtggttggtaaatcgactagatgtggggcatatt 8641 Query: 228 tttccaacaacttcttgttgaaaccaaatccacctgtacagaacacgacattgtttgttt 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8640 tttccaacaacttcttgttgaaaccaaatccacctgtacagaacacgacattgtttgttt 8581 Query: 288 caatggaatgtgttccttctgaatcctcgtagactacaccatttaccttattattctcat 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8580 caatggaatgtgttccttctgaatcctcgtagactacaccatttaccttattattctcat 8521 Query: 348 caagtttgacatcaattaccttgctattcaattggatcttgacgagatctgcgccatacg 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8520 caagtttgacatcaattaccttgctattcaattggatcttgacgagatctgcgccatacg 8461 Query: 408 attgtaacgattttttcaaagtgtctacaatctggaaaccgggtggcagtttcccgctag 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8460 attgtaacgattttttcaaagtgtctacaatctggaaaccgggtggcagtttcccgctag 8401 Query: 468 atctatgggttcttgaaaccgaatgaccacccaattgggcaagtttatccaacggaatct 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8400 atctatgggttcttgaaaccgaatgaccacccaattgggcaagtttatccaacggaatct 8341 Query: 528 gatgctcagtttgtagccaagaaatagcattcgctgaatctttggccaacttctccatca 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8340 gatgctcagtttgtagccaagaaatagcattcgctgaatctttggccaacttctccatca 8281 Query: 588 atgtcacaatacctttccctctagcagatttgatcgtatcatctgcaaataactccggat 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8280 atgtcacaatacctttccctctagcagatttgatcgtatcatctgcaaataactccggat 8221 Query: 648 tatcaattatcttaagtttttcttgagtgtcggtaccagcaccattaataccgcttgacg 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8220 tatcaattatcttaagtttttcttgagtgtcggtaccagcaccattaataccgcttgacg 8161 Query: 708 ccttgatcgaattaccaccaatgcttcctgtcttttccaataaaactattggaatattaa 767 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8160 ccttgatcgaattaccaccaatgcttcctgtcttttccaataaaactattggaatattaa 8101 Query: 768 acttcactagttgggtagaggtcgttaatccagctaattctgatcctataactaccacgg 827 |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct: 8100 acttcactagttgggtagaggtcgttaatccagctaatcctgatcctataactacaacgg 8041 Query: 828 gttttagacatgggttgctttgattctttgtaaacaacgagttggaccaaattttccacc 887 |||| |||||||| |||||| ||||||||| ||||||||||| | ||||||| | | || Sbjct: 8040 gttt-agacatgg-ttgctt-gattctttgaaaacaacgagtag-accaaatatacaaca 7985 Query: 888 atcanaagttaaagtattttaaggttatcgttgtccgcatttaaaaa 934 | | |||| |||||||||||||| ||||||||| |||||||||||| Sbjct: 7984 acaaaaagtaaaagtattttaagg-tatcgttgt-cgcatttaaaaa 7940 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6687 Number of Sequences: 1807 Number of extensions: 6687 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 937 length of database: 10,358,551 effective HSP length: 16 effective length of query: 921 effective length of database: 10,329,639 effective search space: 9513597519 effective search space used: 9513597519 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)