BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC49ZG07RM1.SCF screened BAC_end (951 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1496 1296 0.0 >3x_Contig1496 Length = 9544 Score = 1296 bits (654), Expect = 0.0 Identities = 684/690 (99%), Gaps = 3/690 (0%) Strand = Plus / Plus Query: 46 tttctatcatgcctctgtgttccagagcatgttccggcttctagatgttatcacccttat 105 |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2954 tttctatcatgc-tctgt-ttccagagcatgttccggcttctagatgttatcacccttat 3011 Query: 106 tgagctagcgtctgggaatattccagctcactcttctagcttgaacaagaccccaatcgt 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3012 tgagctagcgtctgggaatattccagctcactcttctagcttgaacaagaccccaatcgt 3071 Query: 166 ttcctttcgctcctgcaacgattatatcgaacagaaatcagctgaagattatagcagaat 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3072 ttcctttcgctcctgcaacgattatatcgaacagaaatcagctgaagattatagcagaat 3131 Query: 226 tcacccagcggtacaatcagaagataacccagaagaattagaagaatcatatggtaaagt 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3132 tcacccagcggtacaatcagaagataacccagaagaattagaagaatcatatggtaaagt 3191 Query: 286 acaagagaatgattccttcctaaatgatacgaagaaatgtgtatggatgagatatccacc 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3192 acaagagaatgattccttcctaaatgatacgaagaaatgtgtatggatgagatatccacc 3251 Query: 346 gatatttattaatctattgcggttcgctcttccaaaaatagttcaagatattatctggtt 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3252 gatatttattaatctattgcggttcgctcttccaaaaatagttcaagatattatctggtt 3311 Query: 406 caagtttataaagtttgttacttttgatgggaaatgtgcgttgatatatgccaacaaatc 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3312 caagtttataaagtttgttacttttgatgggaaatgtgcgttgatatatgccaacaaatc 3371 Query: 466 aattccgcttgacgagtctcaatttaatgcaaagagtttaatatcatatgctagaggttc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3372 aattccgcttgacgagtctcaatttaatgcaaagagtttaatatcatatgctagaggttc 3431 Query: 526 tctttatttcggcaattcaaacttatctgatgaagaactactagcaaagcttgtgctcgt 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3432 tctttatttcggcaattcaaacttatctgatgaagaactactagcaaagcttgtgctcgt 3491 Query: 586 ggctgaacctacattcctgaagcaaaaattcatccttctctcggagttcactaaagtcgt 645 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 3492 ggctgaacctacattcctgaagcaaaaattcatccttctctcggagttcactaaggtcgt 3551 Query: 646 atctgcaagcctaagtgatcgcgacttggtacatcagaaagttgatcaattgacgcaata 705 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3552 atctgcaagcctaagtgatcgcgacttggtacatcagaaagttgatcaattgacgcaata 3611 Query: 706 tgtcaatggtaatattcggactcacatttt 735 ||||||| ||||| ||||||||||||||| Sbjct: 3612 tgtcaat-gtaattatcggactcacatttt 3640 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6586 Number of Sequences: 1807 Number of extensions: 6586 Number of successful extensions: 59 Number of sequences better than 1.0e-20: 1 length of query: 951 length of database: 10,358,551 effective HSP length: 16 effective length of query: 935 effective length of database: 10,329,639 effective search space: 9658212465 effective search space used: 9658212465 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)