BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC49ZG08FM1.SCF screened BAC_end (925 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1142 1279 0.0 >3x_Contig1142 Length = 5741 Score = 1279 bits (645), Expect = 0.0 Identities = 732/757 (96%), Gaps = 3/757 (0%) Strand = Plus / Minus Query: 86 taccaccggtttggtccacttcattgataagatttaatgattttttcctaacattaacat 145 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1299 taccaccggtttgttccacttcattgataagatttaatgattttttcctaacattaacat 1240 Query: 146 catctgaccgcatccatgaatctgaaattaacaaagtatcaatagcagcaagctcagccg 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1239 catctgaccgcatccatgaatctgaaattaacaaagtatcaatagcagcaagctcagccg 1180 Query: 206 cttttgtgatctcatgttcaccataccaagctttgaaatcatctttgtttaaatgatcca 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1179 cttttgtgatctcatgttcaccataccaagctttgaaatcatctttgtttaaatgatcca 1120 Query: 266 aaaaatcgtccattaccaaggcttcctttgaattttttgcatcttcaagcttatgtttat 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1119 aaaaatcgtccattaccaaggcttcctttgaattttttgcatcttcaagcttatgtttat 1060 Query: 326 aagccggatcctttaatacctcatctataccttgtaagtatcctgtagagcaatgtgcga 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1059 aagccggatcctttaatacctcatctataccttgtaagtatcctgtagagcaatgtgcga 1000 Query: 386 ccaaaaacttgccagtatttgcaaggatttttttattctgatcttcttgtgcatattgca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 999 ccaaaaacttgccagtatttgcaaggatttttttattctgatcttcttgtgcatattgca 940 Query: 446 ttaccttgtcatataaagtctttgcgtaaaaccctggtgaacaaattatgatgcatttca 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 939 ttaccttgtcatataaagtctttgcgtaaaaccctggtgaacaaattatgatgcatttca 880 Query: 506 gtgtgtcaaaatcgaaatgtctaaccatggacgcataagtggctctgtaaaatttctcta 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 879 gtgtgtcaaaatcgaaatgtctaaccatggacgcataagtggctctgtaaaatttctcta 820 Query: 566 ccttgtcatcaaacttcattatatctgtacctctcttcttctttggaatgctatattcga 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 819 ccttgtcatcaaacttcattatatctgtacctctcttcttctttggaatgctatattcga 760 Query: 626 tcttatgctttaataccggagagaatgaattgatcaagcaaatgtgggaaataccttctt 685 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 759 tcttatgctttaataccgtagagaatgaattgatcaagcaaatgtgggaaataccttctt 700 Query: 686 gtaagacaacagctgccatatcagaacgaccct-tatattacaagctttgtttaccagat 744 ||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||| Sbjct: 699 gtaagacaacagctgccatatcagaacgaccctcaatattacaagcttgttttacgagat 640 Query: 745 tatccccgtatgaatttgtatcatttttgaacaatgtgaagggggaaaaaaaatatgtgg 804 ||||| |||||||||| ||||| ||||| ||||||||| ||| || | |||| | | Sbjct: 639 tatccacgtatgaattgtaatcatctttgatcaatgtgaatgggtaagagaaat-cgatg 581 Query: 805 gggaaactggaaaaatttaccccctggcaaatcctgg 841 | |||||| ||| ||||||||| |||||||||||||| Sbjct: 580 gtgaaact-gaagaatttacccactggcaaatcctgg 545 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7826 Number of Sequences: 1807 Number of extensions: 7826 Number of successful extensions: 57 Number of sequences better than 1.0e-20: 1 length of query: 925 length of database: 10,358,551 effective HSP length: 16 effective length of query: 909 effective length of database: 10,329,639 effective search space: 9389641851 effective search space used: 9389641851 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)