BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC49ZG10RM1.SCF screened BAC_end (928 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1335 1255 0.0 >3x_Contig1335 Length = 8696 Score = 1255 bits (633), Expect = 0.0 Identities = 726/753 (96%), Gaps = 3/753 (0%) Strand = Plus / Minus Query: 88 tgagtcctgttccaaaggaacggtatattatcatatcgacctcgaaagtatctaaggaat 147 |||||| |||||| || ||| |||||||| ||||||| ||||||||||||| ||||| Sbjct: 1262 tgagtcttgttccgaaagaagggtatatttcaatatcgatatcgaaagtatctagggaat 1203 Query: 148 ctatctggaatacaatgtctttttcatcctcttcttgaataggcaaaataatatttcttg 207 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1202 ctatctggaatacaatgtctttttcgtcctcttcttgaataggcaaaataatatttcttg 1143 Query: 208 gaatgatattcgatacactacaagtaagagtgatgcgtccaggtgaggataacatcattt 267 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1142 gaatgatattcgatacactagaagtaagagtgatgcgtccaggtgaggataacatcattt 1083 Query: 268 cgtcgtccttgttgagcgtgattgattcctttcctggcttgaaagagagttttacaaaaa 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1082 cgtcgtccttgttgagcgtgattgattcctttcctggcttgaaagagagttttacaaaaa 1023 Query: 328 tctttctttccaaaaaattgtgaccatactttcttagagggataattggtggtggtaagg 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1022 tctttctttccaaaaaattgtgaccatactttcttagagggataattggtggtggtaagg 963 Query: 388 tgaaatctggaatatcctttaatgaatcattcagggacagttgatcgtcagaaaaaagtt 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 962 tgaaatctggaatatcctttaatgaatcattcagggacagttgatcgtcagaaaaaagtt 903 Query: 448 ccccgggatctgatggtctcaaacttccagcgagtggtctatctgggaaggcgctataac 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 902 ccccgggatctgatggtctcaaacttccagcgagtggtctatctgggaaggcgctataac 843 Query: 508 gtttgcggtttccagcatagcttaaaagtacattcaatacagaaagatgtccttcccata 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 842 gtttgcggtttccagcatagcttaaaagtacattcaatacagaaagatgtccttcccata 783 Query: 568 atgcatagaaaacttgcgagag-gttttgttgatctttcatgaacacgtctgcacctagt 626 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 782 atgcatagaaaacttgcgagagtgttttgttgatctttcatgaacacgtctgcacctagt 723 Query: 627 tctaataatacttggacggtggtggcgtgtccttcttgaattgcgtagaaaattggtggc 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 tctaataatacttggacggtggtggcgtgtccttcttgaattgcgtagaaaattggtggc 663 Query: 687 catttgttgaaaccatcaatctcatctggattcgcaccataagaaaccaaaagttttatc 746 ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 662 catttgttgaacccatcaatctcatctggatccgcaccataagaaaccaaaagttttatc 603 Query: 747 aattctgatccaccgcccattgtttccaccaaattgcataagacttaaaccttgggaaat 806 ||||||||||||||||||||| || ||| ||| |||| | ||| ||||||||||| ||| Sbjct: 602 aattctgatccaccgcccatttttgcca-caatatgcaaaggacataaaccttggg-aat 545 Query: 807 cttttaatctaaaaaaatttatgtcaccctttt 839 || |||||||| | ||||||||||||||||||| Sbjct: 544 ctcttaatctagataaatttatgtcaccctttt 512 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7392 Number of Sequences: 1807 Number of extensions: 7392 Number of successful extensions: 55 Number of sequences better than 1.0e-20: 1 length of query: 928 length of database: 10,358,551 effective HSP length: 16 effective length of query: 912 effective length of database: 10,329,639 effective search space: 9420630768 effective search space used: 9420630768 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)