BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC49ZH01RM1.SCF screened BAC_end
         (929 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1402                                                        1358   0.0  

>3x_Contig1402 
          Length = 8511

 Score = 1358 bits (685), Expect = 0.0
 Identities = 762/781 (97%), Gaps = 5/781 (0%)
 Strand = Plus / Minus

                                                                        
Query: 61   aaaccagatattgaaggatttctctgagctgat-atatgcttgccggatgggttttgcat 119
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 3496 aaaccagatattgaaggatttctctgagctgatcatatgcttgccggatgggttttgcat 3437

                                                                        
Query: 120  acagtaaatatgaaaaataggtacactttgagtatgctagatagacttttcaacgttaat 179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3436 acagtaaatatgaaaaataggtacactttgagtatgctagatagacttttcaacgttaat 3377

                                                                        
Query: 180  tgatgtaatactaatacaaattggttcaaaagcactatagaccagcagtcaataacacta 239
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3376 tgatgtaatactaatacaaattggttcaaaagcactatagaccagcagtcaataacacta 3317

                                                                        
Query: 240  ggtagaaaacatgctgtgttcgcaataacattgttgagaaattattgctggcaaacattc 299
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3316 ggtagaaaacatgctgtgttcgcaataacattgttgagaaattattgctggcaaacattc 3257

                                                                        
Query: 300  gttacaaacctatatttttcgaagagtcataggttcagtaatactgttcagaattttcat 359
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3256 gttacaaacctatatttttcgaagagtcataggttcagtaatactgttcagaattttcat 3197

                                                                        
Query: 360  tatattaaaactactcgtccctcagtcatgagatctcgtattacactataacgtattacg 419
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3196 tatattaaaactactcgtccctcagtcatgagatctcgtattacactataacgtattacg 3137

                                                                        
Query: 420  tatactgccccgattaataagtaaatttcttcatttaaatcttcaataatcactgagtaa 479
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3136 tatactgccccgattaataagtaaatttcttcatttaaatcttcaataatcactgagtaa 3077

                                                                        
Query: 480  cagtgttttccatcatcatcggtcgttaatttcgaatcaataccactttcgtcaactacc 539
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3076 cagtgttttccatcatcatcggtcgttaatttcgaatcaataccactttcgtcaactacc 3017

                                                                        
Query: 540  ccaccacaaactagtataaatacagttttattccaatcgggttcatcaatcatactgatg 599
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3016 ccaccacaaactagtataaatacagttttattccaatcgggttcatcaatcatactgatg 2957

                                                                        
Query: 600  gaaccctcagtatcgttaacggcttgcagttcttctggtaagtgcttaagtactgcgttg 659
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2956 gaaccctcagtatcgttaacggcttgcagttcttctggtaagtgcttaagtactgcgttg 2897

                                                                        
Query: 660  ttaaacagttttagtaatatgtcagaatgcttcatatggaacttcacctcttcttttgac 719
            ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 2896 ttaaacagttttagtaatatgtcagaatgcttcatatggtacttcacctcttctttggac 2837

                                                                        
Query: 720  atcaataaatctagtctgctgaagcccgcattattgtggtaggttcggattggtgttcta 779
            |||||||||||||||||||||| ||||||||||||| |||| |||||||||| |||  ||
Sbjct: 2836 atcaataaatctagtctgctgaggcccgcattattg-ggta-gttcggattgttgtctta 2779

                                                                        
Query: 780  aggaaatgctgcaattggcaaaatttgcttaaccggcatctgtataaaagattgaactag 839
             | |||||||| | ||| | || ||||||||||||||||||| || |||||| |||||||
Sbjct: 2778 ggtaaatgctgtatttgtc-aattttgcttaaccggcatctg-atgaaagatcgaactag 2721

             
Query: 840  g 840
            |
Sbjct: 2720 g 2720


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7151
Number of Sequences: 1807
Number of extensions: 7151
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 929
length of database: 10,358,551
effective HSP length: 16
effective length of query: 913
effective length of database: 10,329,639
effective search space: 9430960407
effective search space used: 9430960407
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)