BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC49ZH08FM1.SCF screened BAC_end
         (945 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1807                                                        1154   0.0  

>3x_Contig1807 
          Length = 66587

 Score = 1154 bits (582), Expect = 0.0
 Identities = 646/662 (97%), Gaps = 4/662 (0%)
 Strand = Plus / Plus

                                                                         
Query: 85    gcctattaaagcgacgaataatgcaaatatggttaaagaaacttgattcctgtgtaatgt 144
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36783 gcctattaaagcgacgaataatgcaaatatggttaaagaaacttgattcctgtgtaatgt 36842

                                                                         
Query: 145   gttaatgtcacttttttgttcagactcttccttctcaatcttatcgttgtcactcgtgtc 204
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36843 gttaatgtcacttttttgttcagactcttccttctcaatcttatcgttgtcactcgtgtc 36902

                                                                         
Query: 205   tgtttcatcttgcgtgctgggagtatttaactttgcgaatagttttactaagtccggcgc 264
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36903 tgtttcatcttgcgtgctgggagtatttaactttgcgaatagttttactaagtccggcgc 36962

                                                                         
Query: 265   aaaaaagcttccagctacacctagcacggcagaaaccataaatgccactccctcatattc 324
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36963 aaaaaagcttccagctacacctagcacggcagaaaccataaatgccactccctcatattc 37022

                                                                         
Query: 325   tgttttccaacccacatttagagttaagaaaataggcataaagtaaaggacttcacacat 384
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37023 tgttttccaacccacatttagagttaagaaaataggcataaagtaaaggacttcacacat 37082

                                                                         
Query: 385   gaaaaacgttgaaaggaacatattccaaagtagaatcaaagatgcaattagtctgttact 444
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37083 gaaaaacgttgaaaggaacatattccaaagtagaatcaaagatgcaattagtctgttact 37142

                                                                         
Query: 445   accagcactgaaaaacttcttccaagcgtccagataattcttaggatttctcgcactttt 504
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37143 accagcactgaaaaacttcttccaagcgtccagataattcttaggatttctcgcactttt 37202

                                                                         
Query: 505   cactggcgggttttccaagacaaacataagaagaacgcagataagtaatatgattaagct 564
             |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 37203 cactggcgggttttccaagacaaacataagaagaacgcagataagtaaaatgataaagct 37262

                                                                         
Query: 565   agaagcaaatgtgggtgcattgtaagaggtaatacgatatcctctgactgtaaaatcgca 624
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37263 agaagcaaatgtgggtgcattgtaagaggtaatacgatatcctctgactgtaaaatcgca 37322

                                                                         
Query: 625   taatgcaaagagaatagccacttatttgtgctaacgccatacatttaccagccgatgtcc 684
             ||||||||||||||||||||| || ||||||||||||||||||| ||||||| ||||| |
Sbjct: 37323 taatgcaaagagaatagccac-taattgtgctaacgccatacatataccagcagatgtac 37381

                                                                         
Query: 685   gattaatttgagaataattttgaagatcggtggtctattctttgcttttagcgggaatgt 744
             || ||| |||||||||| ||||||||||| || |||| || |||||| |||||| |||||
Sbjct: 37382 ga-taaattgagaataa-tttgaagatcgttgttcta-tccttgcttatagcggtaatgt 37438

               
Query: 745   aa 746
             ||
Sbjct: 37439 aa 37440


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6729
Number of Sequences: 1807
Number of extensions: 6729
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 945
length of database: 10,358,551
effective HSP length: 16
effective length of query: 929
effective length of database: 10,329,639
effective search space: 9596234631
effective search space used: 9596234631
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)