BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC49ZH08RM1.SCF screened BAC_end (939 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1781 1096 0.0 >3x_Contig1781 Length = 20717 Score = 1096 bits (553), Expect = 0.0 Identities = 651/681 (95%), Gaps = 2/681 (0%) Strand = Plus / Minus Query: 48 caaggatcgccatcggagaaggcgaggggcaattaagtgcctgggcagagaggcattctc 107 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18656 caaggatcgcc-tcggagaaggcgaggggcaattaagtgcctgggcagagaggcattctc 18598 Query: 108 tcttttttttttttttgttttggtgtttaagtgggtgtttcttttggcctcgagacgata 167 |||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 18597 tctttttttttttttttttttggtgtttttgtggttgtttcttttggcctcgagacgata 18538 Query: 168 cacagaaacatgcgcaggatcgggaatatcatgcaatgtggaaagcgaagattgtggctc 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18537 cacagaaacatgcgcaggatcgggaatatcatgcaatgtggaaagcgaagattgtggctc 18478 Query: 228 gaacgagaacatcgtgcatgcagagcgcctttttctagggtagaaggatatagggaagcg 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18477 gaacgagaacatcgtgcatgcagagcgcctttttctagggtagaaggatatagggaagcg 18418 Query: 288 gactttagccaaggagctgacggagtcttatttgagaaaggtacagtattaacaggtaat 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18417 gactttagccaaggagctgacggagtcttatttgagaaaggtacagtattaacaggtaat 18358 Query: 348 aagaagcaggaaataggtttgtggttcgtgattcatggttcatcgttgacaatcgcatgt 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18357 aagaagcaggaaataggtttgtggttcgtgattcatggttcatcgttgacaatcgcatgt 18298 Query: 408 gactaaactgattataactcagaggcacatccatagccgccaccgcctggagtctggatc 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18297 gactaaactgattataactcagaggcacatccatagccgccaccgcctggagtctggatc 18238 Query: 468 acgatcttatctccaggacgcatcataacggtgttcttacctcccaagttcacaatggaa 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18237 acgatcttatctccaggacgcatcataacggtgttcttacctcccaagttcacaatggaa 18178 Query: 528 ccttcggtgtcttcactttctcctcctcttattcacaggttcattcctcttttttcatta 587 |||||||||||||||||| ||||||||||||| ||||||||||||||||||| | ||| | Sbjct: 18177 ccttcggtgtcttcacttcctcctcctcttatccacaggttcattcctctttctccatca 18118 Query: 588 ccaccaccttggagtccattatgctgatgaactctttttctttaaaggattgaagcttgc 647 ||||||||||||||||||||| || ||||||||||| | | ||||||||||||||||| Sbjct: 18117 ccaccaccttggagtccattaggcggatgaactcttctctctgaaaggattgaagcttgc 18058 Query: 648 acttggtctgtaaattccactt-ttgaatgacaccatttcctttatggaaattggcccca 706 ||||| |||||||||||||||| | ||||||||||||| ||| | |||| ||| || || Sbjct: 18057 acttgttctgtaaattccacttctcgaatgacaccattccctccacggaatttgcccaca 17998 Query: 707 cttccagacgccttttttatt 727 | |||||||||||| ||||| Sbjct: 17997 ccgccagacgcctttcttatt 17977 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 14,766 Number of Sequences: 1807 Number of extensions: 14766 Number of successful extensions: 1712 Number of sequences better than 1.0e-20: 1 length of query: 939 length of database: 10,358,551 effective HSP length: 16 effective length of query: 923 effective length of database: 10,329,639 effective search space: 9534256797 effective search space used: 9534256797 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)