BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC49ZH09RM1.SCF screened BAC_end (950 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1758 1306 0.0 >3x_Contig1758 Length = 25930 Score = 1306 bits (659), Expect = 0.0 Identities = 736/754 (97%), Gaps = 7/754 (0%) Strand = Plus / Plus Query: 49 ttaaaatacttttcatacgcaaagacgaacaattcaaaactcacaaacttttctttatat 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13542 ttaaaatacttttcatacgcaaagacgaacaattcaaaactcacaaacttttctttatat 13601 Query: 109 aacgagcacacagcattataagtctgttccaagtgcactgtactcagaataaaattaaat 168 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 13602 aacgagcacacagcattata-gtctgttccaagtgcactgtactcagaataaaattaaat 13660 Query: 169 aatggaacaacgacaacatttaatgtacgttaggtttaaccaaaccctaattcgcatctt 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13661 aatggaacaacgacaacatttaatgtacgttaggtttaaccaaaccctaattcgcatctt 13720 Query: 229 tctcaaagttaaaatagtaactcaataaaaaatatagacattggtagtggagtaaaacta 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13721 tctcaaagttaaaatagtaactcaataaaaaatatagacattggtagtggagtaaaacta 13780 Query: 289 agaaatgaaaaatgaaatataaacgattatatatattgcagttaatcttggtactgttgt 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13781 agaaatgaaaaatgaaatataaacgattatatatattgcagttaatcttggtactgttgt 13840 Query: 349 aacattaaccagttattcttgtattgctctaaggaaccaaccacttcatcttgtttcgaa 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13841 aacattaaccagttattcttgtattgctctaaggaaccaaccacttcatcttgtttcgaa 13900 Query: 409 cttgactttctgccggttctaatctttcctggcgagttgacccttccggctgaaaagaaa 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13901 cttgactttctgccggttctaatctttcctggcgagttgacccttccggctgaaaagaaa 13960 Query: 469 tggggttcgtcatcttcgaaaaacacagcatcgttatcaatgaacacatcattcttctgc 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13961 tggggttcgtcatcttcgaaaaacacagcatcgttatcaatgaacacatcattcttctgc 14020 Query: 529 aagcttgtagaagcggctgaaagatatggattgtgaggtaagatgaaacggtcctgggcg 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14021 aagcttgtagaagcggctgaaagatatggattgtgaggtaagatgaaacggtcctgggcg 14080 Query: 589 tttaagccaccattaccgttgacattgacattgacaggttttctatttccgaaacttatt 648 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 14081 tttaagccaccattaccgttgacattgacattgacaggtttcctatttccgaaac-tatt 14139 Query: 649 tcttttcaccccgtttgtgtgttgacctggaactaaattgtcatggcccaatgttgaaac 708 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 14140 tcttttcaacccgtttgtgtgttgacctggaactaaattgtcatgg-ccaatgttgaaac 14198 Query: 709 tttttttatgatgaggaggttcatacacaccttgaaaattccttggtttgaacttgtggg 768 ||||| |||||||||||||| ||||||||||| ||||||| | || ||||||||| || Sbjct: 14199 tttttctatgatgaggaggtacatacacacct--gaaattcccttgtctgaacttgt-gg 14255 Query: 769 ttggtcttttttgcggaatgcgcccaagttacat 802 |||||| || |||||||||||||| |||| |||| Sbjct: 14256 ttggtc-ttcttgcggaatgcgccaaagtaacat 14288 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8490 Number of Sequences: 1807 Number of extensions: 8490 Number of successful extensions: 70 Number of sequences better than 1.0e-20: 1 length of query: 950 length of database: 10,358,551 effective HSP length: 16 effective length of query: 934 effective length of database: 10,329,639 effective search space: 9647882826 effective search space used: 9647882826 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)