BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC4ZA05RM1.SCF screened BAC_end (962 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1429 1239 0.0 >3x_Contig1429 Length = 8041 Score = 1239 bits (625), Expect = 0.0 Identities = 648/653 (99%), Gaps = 2/653 (0%) Strand = Plus / Plus Query: 48 agaatcagaaagatgatgatgatgacgaatatattagaaaagttcgtacagctgtagaac 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3759 agaatcagaaagatgatgatgatgacgaatatattagaaaagttcgtacagctgtagaac 3818 Query: 108 aattcgaaaaggcaggcttcttcgaggatttagacgatactaaaaagggttcaaaaacaa 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3819 aattcgaaaaggcaggcttcttcgaggatttagacgatactaaaaagggttcaaaaacaa 3878 Query: 168 aagccatggtatataagctagcagacgaggtgatagcccgacataaagactaactcttac 227 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 3879 aagccatggtatataagctagcagacgaggtgatagcccgacataaagacaaactcttac 3938 Query: 228 gcataagagacccaaattatgataagtgg-tctgaaccattaaaaacccccatgatagat 286 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 3939 gcataagagacccaaattatgataagtgggtctgaaccattaaaaacccccatgatagat 3998 Query: 287 aaatatcatgaaatcaaagaagaatggagacgtgaggaaacgaaccacggttccagtagt 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3999 aaatatcatgaaatcaaagaagaatggagacgtgaggaaacgaaccacggttccagtagt 4058 Query: 347 ttaaacaacagttcaatgactacacagaatgttacatttgcatggagttcaaatgctcat 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4059 ttaaacaacagttcaatgactacacagaatgttacatttgcatggagttcaaatgctcat 4118 Query: 407 cgaccggagctgaccgcaccaaagaagcctttggaaccgcattccaataagaaatcaaca 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4119 cgaccggagctgaccgcaccaaagaagcctttggaaccgcattccaataagaaatcaaca 4178 Query: 467 aatgaaatactacggagtaaagcaatgaaaagcgctcatgaattaagaagtaagcaaatt 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4179 aatgaaatactacggagtaaagcaatgaaaagcgctcatgaattaagaagtaagcaaatt 4238 Query: 527 ctgctcaataaactgcgggataaaaatgatagaaacaatctgccttcacaggatggtgat 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4239 ctgctcaataaactgcgggataaaaatgatagaaacaatctgccttcacaggatggtgat 4298 Query: 587 gatgtcaagccgaaatttaaaatggatcccttggaaccatttgtcgccaaagctttaccg 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4299 gatgtcaagccgaaatttaaaatggatcccttggaaccatttgtcgccaaagctttaccg 4358 Query: 647 agagagaagatgaagcgaccaaaggaacaaaaggaagagcaaattttggtttt 699 |||||||||| |||||||||||||| | ||||||||||||||||||||||||| Sbjct: 4359 agagagaagaagaagcgaccaaagg-agaaaaggaagagcaaattttggtttt 4410 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7709 Number of Sequences: 1807 Number of extensions: 7709 Number of successful extensions: 85 Number of sequences better than 1.0e-20: 1 length of query: 962 length of database: 10,358,551 effective HSP length: 16 effective length of query: 946 effective length of database: 10,329,639 effective search space: 9771838494 effective search space used: 9771838494 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)