BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC4ZA07FM1.SCF screened BAC_end (912 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1706 1156 0.0 >3x_Contig1706 Length = 16303 Score = 1156 bits (583), Expect = 0.0 Identities = 658/674 (97%), Gaps = 7/674 (1%) Strand = Plus / Minus Query: 88 cagcttcaggagtggcatgtgtttcgttctttgaaaagtacagcgactttgagttaaacc 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10316 cagcttcaggagtggcatgtgtttcgttctttgaaaagtacagcgactttgagttaaacc 10257 Query: 148 ttggtttccacgagagaagtgtcgagattttgcacaaaggagccaagaatatttcggatc 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10256 ttggtttccacgagagaagtgtcgagattttgcacaaaggagccaagaatatttcggatc 10197 Query: 208 ttgaaagtaattgttctttatgggaagaatgcatcaatagaagtg-aaaaacaattggac 266 |||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 10196 ttgaaagtaaatgtactttatgggaagaatgcatcaatagaagtgcaaaaacaattggac 10137 Query: 267 gtcaatcacaccagaaaactatatgaagaatgtatagaaacattgcccaattctaaagca 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10136 gtcaatcacaccagaaaactatatgaagaatgtatagaaacattgcccaattctaaagca 10077 Query: 327 atcaagtttctacttccatttgctatcttagaagaatcgcgtaatgaggttgctcgttgt 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10076 atcaagtttctacttccatttgctatcttagaagaatcgcgtaatgaggttgctcgttgt 10017 Query: 387 agagcattgttagactacgggagcaaattactgaagcccgcacagaatgaagaactttgg 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10016 agagcattgttagactacgggagcaaattactgaagcccgcacagaatgaagaactttgg 9957 Query: 447 gatttctggaggaatttcgaaactatgcacggtacaaaagactcgttcaagaacatgcta 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9956 gatttctggaggaatttcgaaactatgcacggtacaaaagactcgttcaagaacatgcta 9897 Query: 507 aaagcacgtaggttcctagaggacacaatgaaagtaaatacagaggaagtatccagacat 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9896 aaagcacgtaggttcctagaggacacaatgaaagtaaatacagaggaagtatccagacat 9837 Query: 567 gcagatagcatcgaatttanggcgtcaactgcgaaaattagtggaagcgg-ccaccaagc 625 ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 9836 gcagatagcatcgaatttagggcgtcaactgcgaaaattagtggaagcggaccaccaagc 9777 Query: 626 gcagaagattaaggatactcaaatacggctgaaattgatttaggtctattaaatggatat 685 ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 9776 gcagaagataaaggatactcaaatacggctgaaattgatttaggtctataaaatggatat 9717 Query: 686 attttggattaaagttggttattggcatatcggatcaatcttttatgtttttgttttggg 745 || || |||||||||| | || ||||||||| ||||||||| ||||| ||||||||| || Sbjct: 9716 atatt-gattaaagtt-gataatggcatatc-gatcaatctcttatg-ttttgtttt-gg 9662 Query: 746 aagatgtcgtattg 759 |||||||||||||| Sbjct: 9661 aagatgtcgtattg 9648 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7023 Number of Sequences: 1807 Number of extensions: 7023 Number of successful extensions: 41 Number of sequences better than 1.0e-20: 1 length of query: 912 length of database: 10,358,551 effective HSP length: 16 effective length of query: 896 effective length of database: 10,329,639 effective search space: 9255356544 effective search space used: 9255356544 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)