BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC4ZB02FM1.SCF screened BAC_end (995 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1516 936 0.0 >3x_Contig1516 Length = 8750 Score = 936 bits (472), Expect = 0.0 Identities = 495/503 (98%) Strand = Plus / Minus Query: 89 cgtggacagagaaaacagtttctggagtggtgtaaagtttgtcgttagaagtaccttcgt 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5074 cgtggacagagaaaacagtttctggagtggtgtaaagtttgtcgttagaagtaccttcgt 5015 Query: 149 tgttgacaccatcttcttcaccacctgtgataccgatttccatttccaaccattggtgga 208 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 5014 tgttgacaccatcttcttcaccaccggtgataccgatttccatttccaaccattggtgga 4955 Query: 209 tcttggccattcttgngatgtatttgacacatagaccaatgttttcctcatcagtttctt 268 ||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4954 tcttggccattctggtgaagtatttgacacatagaccaatgttttcctcatcagtttctt 4895 Query: 269 cggacaaatccaacatgtgggaggagaacaatggttcaccgtgcttagcgaagtattctt 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4894 cggacaaatccaacatgtgggaggagaacaatggttcaccgtgcttagcgaagtattctt 4835 Query: 329 cgtcagcctttagcataccatcgaaccatggtagcaacttcttagcacaatgatcggtgt 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4834 cgtcagcctttagcataccatcgaaccatggtagcaacttcttagcacaatgatcggtgt 4775 Query: 389 gtagaacaactgggataccgtaagctggagcaatggatctgatgtagtgagcagcagcga 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4774 gtagaacaactgggataccgtaagctggagcaatggatctgatgtagtgagcagcagcga 4715 Query: 449 tagaacctctgatagaagcattttggccttcgttggaaacacccttaccagcaaagtaag 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4714 tagaacctctgatagaagcattttggccttcgttggaaacacccttaccagcaaagtaag 4655 Query: 509 cagcaccaccgttggaagtttgcaaaatgattggagatttggtgcctctagcagcttcca 568 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 4654 cagcaccaccgttggaagtttgcaaaatgattggagatttgttgtctctagcagcttcca 4595 Query: 569 aagcagcaacatcattggaagaa 591 ||||||||||| || |||||||| Sbjct: 4594 aagcagcaacaacagtggaagaa 4572 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7983 Number of Sequences: 1807 Number of extensions: 7983 Number of successful extensions: 52 Number of sequences better than 1.0e-20: 1 length of query: 995 length of database: 10,358,551 effective HSP length: 16 effective length of query: 979 effective length of database: 10,329,639 effective search space: 10112716581 effective search space used: 10112716581 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)