BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC4ZB05FM1.SCF screened BAC_end (946 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1698 967 0.0 >3x_Contig1698 Length = 21001 Score = 967 bits (488), Expect = 0.0 Identities = 553/570 (97%), Gaps = 4/570 (0%) Strand = Plus / Plus Query: 88 aaccatccagttccgacctaaaattagatgcgaattcctagattccagaagggctgtcca 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18413 aaccatccagttccgacctaaaattagatgcgaattcctagattccagaagggctgtcca 18472 Query: 148 tttatcttgagcccagacggcccatgctaatcgccttcgtagtccacgttcccagcgagg 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18473 tttatcttgagcccagacggcccatgctaatcgccttcgtagtccacgttcccagcgagg 18532 Query: 208 taatctccagnnct-actttcaacaccgaggccaagttcctctgacaaagcaacaacttc 266 |||||||||| | || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 18533 taatctccagtcttgacaatcaacaccgaggccaagttcctctgacaaagcaacaacttc 18592 Query: 267 cgaacatagtacccaattgttgggacattcactacgacaatgcaaaattagtaaacctgc 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18593 cgaacatagtacccaattgttgggacattcactacgacaatgcaaaattagtaaacctgc 18652 Query: 327 ttggacaatgcttaatttgggtctttcaaacacctcgtagaaagtttttaatgcaatatc 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18653 ttggacaatgcttaatttgggtctttcaaacacctcgtagaaagtttttaatgcaatatc 18712 Query: 387 attcaattgattcgcaacatctggtttaggaaaaccaatcaattgcgggtggaaatccca 446 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 18713 attcaattgattcgcaacatctggtttaggaaaaccaatcaattgcgggt-gaaatccca 18771 Query: 447 ccattgtaaagctagggaataaatggatgcaagaattggcgccgtgagttcacgattaga 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 18772 ccattgtaaagctagggaataaatggatgcaagaattggcgccgtgagttcacgataaga 18831 Query: 507 tcttgagtacttctcc-aaaatacttcttcgtgtagaatgggaaagttatgatgaatcag 565 |||||||||||||||| |||||||| |||||||||||||||||||| | |||||||||| Sbjct: 18832 tcttgagtacttctccaaaaatactcgttcgtgtagaatgggaaagtaaggatgaatcag 18891 Query: 566 tttaaagaaaatttcaaccaatattttaccatgaggatgcactattttttccactaaatc 625 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 18892 tttaaagaaaatttcaaccaatattttaccatgaggatgcactagtttttccactaaatc 18951 Query: 626 tatattacgtttctggcttcaagtaaagtt 655 ||||| ||| |||| ||||||||||||||| Sbjct: 18952 tatatcacg-ttcttgcttcaagtaaagtt 18980 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7815 Number of Sequences: 1807 Number of extensions: 7815 Number of successful extensions: 80 Number of sequences better than 1.0e-20: 1 length of query: 946 length of database: 10,358,551 effective HSP length: 16 effective length of query: 930 effective length of database: 10,329,639 effective search space: 9606564270 effective search space used: 9606564270 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)