BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC4ZB07FM1.SCF screened BAC_end (912 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1711 1134 0.0 >3x_Contig1711 Length = 15491 Score = 1134 bits (572), Expect = 0.0 Identities = 627/640 (97%), Gaps = 4/640 (0%) Strand = Plus / Minus Query: 89 caacggtgttttcaccacaagccaaaccttgaagcagaaaaaggtagaaaacctaaaatg 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7886 caacggtgttttcaccacaagccaaaccttgaagcagaaaaaggtagaaaacctaaaatg 7827 Query: 149 atccaaaaaaactggagaattagaaagacctgaccagagtaataccaacctttgggtcct 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7826 atccaaaaaaactggagaattagaaagacctgaccagagtaataccaacctttgggtcct 7767 Query: 209 ctgatgtgcattttgtttttcgacagtaaaggcaaagatatatgttttttttccttccag 268 |||||||||| | | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7766 ctgatgtgcaaatagcttttcgacagtaaaggcaaagatatatgttttttttccttccag 7707 Query: 269 aaatattagtcttggttctcttttttaatcgaaagcctttcctttactagtcttacttgc 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7706 aaatattagtcttggttctcttttttaatcgaaagcctttcctttactagtcttacttgc 7647 Query: 329 atcatgaacgttgcgaggacaagactcataggtgccaaaaaaaaaccaaatacaactggc 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7646 atcatgaacgttgcgaggacaagactcataggtgccaaaaaaaaaccaaatacaactggc 7587 Query: 389 acttatataataatgggaaagtttaatgttaccaccagccagaacggaactttggctatg 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7586 acttatataataatgggaaagtttaatgttaccaccagccagaacggaactttggctatg 7527 Query: 449 gctactcagttcattcagctcagctcttgcagatcttttgatgccacctgcctggtgttt 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7526 gctactcagttcattcagctcagctcttgcagatcttttgatgccacctgcctggtgttt 7467 Query: 509 ttcaagcaacatgggatgaataaggaacacatagtgaactcagtaactaaggagttttca 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7466 ttcaagcaacatgggatgaataaggaacacatagtgaactcagtaactaaggagttttca 7407 Query: 569 ccataaccgacggcacgaagaaatttctttgtgccgtacgtaaagatcaatgtgtaatac 628 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 7406 ccataaccgacggcacgaagaaatttctttgtgccgtacgtaaagatcaatgtgtcatac 7347 Query: 629 actggttcgcttcacagttgtatgtattgtaaaaattggacagcctaaaacaagtgggca 688 ||||||||||||||||||||||||||||||||||| |||||||||| | ||| ||||||| Sbjct: 7346 actggttcgcttcacagttgtatgtattgtaaaaa-tggacagcct-agacaggtgggca 7289 Query: 689 gcgggggggcattcaagggcccataattgtggaggcgaca 728 || |||| |||| |||||| |||||||||||||||||||| Sbjct: 7288 gc-ggggcgcatccaaggg-ccataattgtggaggcgaca 7251 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7690 Number of Sequences: 1807 Number of extensions: 7690 Number of successful extensions: 55 Number of sequences better than 1.0e-20: 1 length of query: 912 length of database: 10,358,551 effective HSP length: 16 effective length of query: 896 effective length of database: 10,329,639 effective search space: 9255356544 effective search space used: 9255356544 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)