BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC4ZB08FM1.SCF screened BAC_end (946 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1413 912 0.0 >3x_Contig1413 Length = 8782 Score = 912 bits (460), Expect = 0.0 Identities = 491/500 (98%), Gaps = 1/500 (0%) Strand = Plus / Plus Query: 89 aggtatcgttttcacacaattgaagactaccgatccatcatcactgtcttcaacgctaat 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4513 aggtatcgttttcacacaattgaagactaccgatccatcatcactgtcttcaacgctaat 4572 Query: 149 taaatcagcaaattggaactcgttcgcggaattattaggctggatgagtgaaaaaaagtt 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4573 taaatcagcaaattggaactcgttcgcggaattattaggctggatgagtgaaaaaaagtt 4632 Query: 209 tatctctgtctttgataaatttatagcagatctcgaaaaaatccctcccaaagttccccg 268 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4633 tatctctgtcagtgataaatttatagcagatctcgaaaaaatccctcccaaagttccccg 4692 Query: 269 tgatcaagagccctctgtgcaccttttaatcctaggaatgcgttatttgaggcttaaaaa 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4693 tgatcaagagccctctgtgcaccttttaatcctaggaatgcgttatttgaggcttaaaaa 4752 Query: 329 ctatcctctagaaatgtttgaggaaagtgcagggttcatcaaatctatttcgaagttctt 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4753 ctatcctctagaaatgtttgaggaaagtgcagggttcatcaaatctatttcgaagttctt 4812 Query: 389 tgctccgtcccaaaacacttctattcgtttggcttatgctgaagtactaagtcaactttt 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4813 tgctccgtcccaaaacacttctattcgtttggcttatgctgaagtactaagtcaactttt 4872 Query: 449 attgccggtgggctggagcaatgacagcagaggcttatcattccacgtggatagaagcaa 508 |||||| || ||||||||||||||||||||||||| ||||| | |||||||||||||||| Sbjct: 4873 attgcc-gttggctggagcaatgacagcagaggctaatcatccaacgtggatagaagcaa 4931 Query: 509 tgacgttgatcctagctacctgtaaaaaacttcaaactgacagcaaatgctggacacttg 568 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4932 tgacgtcgatcctagctacctgtaaaaaacttcaaactgacagcaaatgctggacacttg 4991 Query: 569 ctttcaagtttaccgtggca 588 |||||||||| ||||||||| Sbjct: 4992 ctttcaagttgaccgtggca 5011 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 18,534 Number of Sequences: 1807 Number of extensions: 18534 Number of successful extensions: 91 Number of sequences better than 1.0e-20: 1 length of query: 946 length of database: 10,358,551 effective HSP length: 16 effective length of query: 930 effective length of database: 10,329,639 effective search space: 9606564270 effective search space used: 9606564270 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)