BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC4ZB09RM1.SCF screened BAC_end (1157 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1711 878 0.0 >3x_Contig1711 Length = 15491 Score = 878 bits (443), Expect = 0.0 Identities = 462/466 (99%), Gaps = 2/466 (0%) Strand = Plus / Minus Query: 71 caancttcaacggtgttttcaccacaagccaaaccttgaagcagaaaa-ggtagaaaacc 129 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 7893 caagcttcaacggtgttttcaccacaagccaaaccttgaagcagaaaaaggtagaaaacc 7834 Query: 130 taaaatgatccaaaaaaactggagaattagaaagacctgaccagagtaataccaaccttt 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7833 taaaatgatccaaaaaaactggagaattagaaagacctgaccagagtaataccaaccttt 7774 Query: 190 gggtcctctgatgtgcaaatagcttttcgacagtaaaggcaaagatatatgttttttttc 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7773 gggtcctctgatgtgcaaatagcttttcgacagtaaaggcaaagatatatgttttttttc 7714 Query: 250 cttccagaaatattagtcttggttctcttttttaatcgaaagcctttcctttactagtct 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7713 cttccagaaatattagtcttggttctcttttttaatcgaaagcctttcctttactagtct 7654 Query: 310 tacttgcatcatgaacgttgcgaggacaagactcataggtgccaaaaaaaaaccaaatac 369 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7653 tacttgcatcatgaacgttgcgaggacaagactcataggtgccaaaaaaaaaccaaatac 7594 Query: 370 aactggcacttatataataatgggaaagtttaatgttaccaccagccagaacggaacttt 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7593 aactggcacttatataataatgggaaagtttaatgttaccaccagccagaacggaacttt 7534 Query: 430 ggctatggctactcagttcattcagctcagctcttgcagatcttttgatgccacctgcct 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7533 ggctatggctactcagttcattcagctcagctcttgcagatcttttgatgccacctgcct 7474 Query: 490 ggtgtttttcaagcaacatggggatgaataaggaacacatattgaa 535 ||||||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 7473 ggtgtttttcaagcaacat-gggatgaataaggaacacatagtgaa 7429 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 11,324 Number of Sequences: 1807 Number of extensions: 11324 Number of successful extensions: 84 Number of sequences better than 1.0e-20: 1 length of query: 1157 length of database: 10,358,551 effective HSP length: 16 effective length of query: 1141 effective length of database: 10,329,639 effective search space: 11786118099 effective search space used: 11786118099 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)