BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC4ZB10RM1.SCF screened BAC_end (868 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1785 454 e-127 >3x_Contig1785 Length = 37935 Score = 454 bits (229), Expect = e-127 Identities = 229/229 (100%) Strand = Plus / Plus Query: 55 aatattggctaagtatgatttacttggttcttttaatggcaggtttcaacttctcctccc 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15426 aatattggctaagtatgatttacttggttcttttaatggcaggtttcaacttctcctccc 15485 Query: 115 atggttctcaagatcttttcccaacaatgttgacttctcaataccaattctccgctgatg 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15486 atggttctcaagatcttttcccaacaatgttgacttctcaataccaattctccgctgatg 15545 Query: 175 catcaactgttacaaactctgttgcaaaccttggtgccatcgctggtggtatcattgttg 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15546 catcaactgttacaaactctgttgcaaaccttggtgccatcgctggtggtatcattgttg 15605 Query: 235 cccatgcctcctctttctttggtcgtagattctctatcattgtatgttg 283 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15606 cccatgcctcctctttctttggtcgtagattctctatcattgtatgttg 15654 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 14,140 Number of Sequences: 1807 Number of extensions: 14140 Number of successful extensions: 153 Number of sequences better than 1.0e-20: 1 length of query: 868 length of database: 10,358,551 effective HSP length: 16 effective length of query: 852 effective length of database: 10,329,639 effective search space: 8800852428 effective search space used: 8800852428 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)