BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC4ZB11FM1.SCF screened BAC_end (991 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1777 973 0.0 >3x_Contig1777 Length = 26319 Score = 973 bits (491), Expect = 0.0 Identities = 590/615 (95%), Gaps = 6/615 (0%) Strand = Plus / Minus Query: 91 caaatgaaaatgagctagcgagtaacacagtaacacgatgtggacgataaattgtcttat 150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3696 caaatgaaaatgagctagcgagtaacacagtaacacgatgtggacgataaattgtcttat 3637 Query: 151 ccaggtctttattgttgatcatctttttcaaggattatcatcttgatagataaagatgtc 210 ||||||||||||||||||||| | |||||||||| |||||||||||||||||||||| Sbjct: 3636 ccaggtctttattgttgatcagcggcatcaaggattagcatcttgatagataaagatgtc 3577 Query: 211 agacaacgatggatca-atgttatagcgatttaataggtgtttttccctattatttcttc 269 ||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3576 agacaacgagggagcgtatgttatagcgatttaataggtgtttttccctattatttcttc 3517 Query: 270 gtagaagttgtcttcatgaatagttttactaactagatgagtatgcgttgctgaatgtca 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3516 gtagaagttgtcttcatgaatagttttactaactagatgagtatgcgttgctgaatgtca 3457 Query: 330 attcaagcacaaactatctaatacagatttaatgacggtccagagaactatgaagatttt 389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3456 attcaagcacaaactatctaatacagatttaatgacggtccagagaactatgaagatttt 3397 Query: 390 gaccaagagcatttctcagattacgacggatttgatgagggcgagggtaagtttggcgat 449 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3396 gaccaagagcatttctcagattacgacggatttgatgagggcgagggtaagtttggcgat 3337 Query: 450 gagaacggattacgcacagatgaaaacgggaacacgatagttgctggaggatttggtcca 509 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3336 gagaacggattaggcacagatgaaaacgggaacacgatagttgctggaggatttggtcca 3277 Query: 510 gaagagttccagcaacaggaggctcgttggagaagaactttgaaggagaaggctatcgcc 569 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 3276 gaagagttccagcaacaggaggctcgtcggagaagaactttgaaggagaaggctatcgcc 3217 Query: 570 aaggaagatagaactacaacaccatacatgacataattccaaagacccagaattttaggt 629 ||||||||||||||||||||||||||||||||| | | | ||||| |||||||||||||| Sbjct: 3216 aaggaagatagaactacaacaccatacatgacaaagtacgaaagagccagaattttaggt 3157 Query: 630 accagaacccttgcaaatatctattaacgcaccagtgctcggttgaccttggcaaggtga 689 ||||| | |||||||||||||||| |||||||||||| || ||||| ||||| ||||||| Sbjct: 3156 accag-agccttgcaaatatctatgaacgcaccagtgttc-gttga-cttgg-aaggtga 3101 Query: 690 aacccgacccattga 704 || |||||||||||| Sbjct: 3100 aa-ccgacccattga 3087 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7457 Number of Sequences: 1807 Number of extensions: 7457 Number of successful extensions: 42 Number of sequences better than 1.0e-20: 1 length of query: 991 length of database: 10,358,551 effective HSP length: 16 effective length of query: 975 effective length of database: 10,329,639 effective search space: 10071398025 effective search space used: 10071398025 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)