BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC4ZB12FM1.SCF screened BAC_end
         (1291 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1764                                                         549   e-156

>3x_Contig1764 
          Length = 22510

 Score =  549 bits (277), Expect = e-156
 Identities = 344/364 (94%), Gaps = 3/364 (0%)
 Strand = Plus / Minus

                                                                         
Query: 118   ctctcatgatggtggtcaagaaggatggaacctcttgattagcttcactcaacaaactaa 177
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15171 ctctcatgatggtggtcaagaaggatggaacctcttgattagcttcactcaacaaactaa 15112

                                                                         
Query: 178   ccaattccttagcgacattcttgtttccacggttaaagaaggtagtagcaacaccggtgt 237
             ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 15111 ccaattccttagcgacattcttgttaccacggttaaagaaggtagtagcaacaccggtgt 15052

                                                                         
Query: 238   taccggctctttttttttctaccaannctgnggacgtaatcatcgatatcatttggcaag 297
             ||||||| |      || |||||||  ||| |||||||||||||||||||||||||||||
Sbjct: 15051 taccggcacgaccagtt-ctaccaattctgtggacgtaatcatcgatatcatttggcaag 14993

                                                                         
Query: 298   tcaaagttgataacatgagtaacgtctggaatatccaaacctctagcagcgacagcggta 357
             ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 14992 tcaaagttgataacatgagtaacgtttggaatatccaaacctctagcagcgacagcggta 14933

                                                                         
Query: 358   gcaaccaagatagtagctctaccggccttgaaagcagacaacgcacgttcacgttcacct 417
             ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 14932 gcaaccaagatagtagctctaccggtcttgaaagcagacaacgcacgttcacgttcacct 14873

                                                                         
Query: 418   tgcgtacggtcaccatggatagcagnagccctcgaaaccttccatgatccaagaagncag 477
             || |||||||||||||||||||||| || ||| ||||||||||||||| ||||||| |||
Sbjct: 14872 tgtgtacggtcaccatggatagcagtag-ccttgaaaccttccatgat-caagaagtcag 14815

                 
Query: 478   tcaa 481
             ||||
Sbjct: 14814 tcaa 14811


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6523
Number of Sequences: 1807
Number of extensions: 6523
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 1291
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1275
effective length of database: 10,329,639
effective search space: 13170289725
effective search space used: 13170289725
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)