BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC4ZC03RM1.SCF screened BAC_end (1004 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1684 1235 0.0 >3x_Contig1684 Length = 14609 Score = 1235 bits (623), Expect = 0.0 Identities = 647/654 (98%), Gaps = 2/654 (0%) Strand = Plus / Plus Query: 41 gcttggtaaacagccaagatatccataccgttaaccttcaaaccaggaatgtattgacca 100 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 153 gcttggtaaacagccaagatatccataccgttaaccttcaaaccaggaatgtattgacca 212 Query: 101 cgcttgaagtattcagtcatggctgaagatcttgcggcagcggtacccataccgtacttg 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 213 cgcttgaagtattcagtcatggctgaagatcttgcggcagcggtacccataccgtacttg 272 Query: 161 ttgttttcacaacagaagacggctggtaagttccataacttggccatgttgaaggattcg 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 ttgttttcacaacagaagacggctggtaagttccataacttggccatgttgaaggattcg 332 Query: 221 aaaacttgaccttggttagaggcaccatcaccgtacaaggcaaaagaacaagcatcttcg 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 333 aaaacttgaccttggttagaggcaccatcaccgtacaaggcaaaagaacaagcatcttcg 392 Query: 281 tgtttgtattgatgagcgaaggccaaaccagcacccaatgggacttgggcaccaacgata 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 tgtttgtattgatgagcgaaggccaaaccagcacccaatgggacttgggcaccaacgata 452 Query: 341 ccattaccaccgtagaaaccaggggcgtacaagtgcatggaaccacccttaccgaaggac 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 ccattaccaccgtagaaaccaggggcgtacaagtgcatggaaccacccttaccgaaggac 512 Query: 401 acaccagttcttctacccatcaattcagccaacacagcttgaacagcagcacctctcatg 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 513 acaccagttcttctacccatcaattcagccaacacagcttgaacagcagcacctctcatg 572 Query: 461 taggtgaaaccatgacatctgtaagaggtgatgacggtatcacgcttagtgatagcgttt 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 taggtgaaaccatgacatctgtaagaggtgatgacggtatcacgcttagtgatagcgttt 632 Query: 521 tcaataccaacggcaatggcttcttgaccgacagaggagtgacagaaacctctaattttc 580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 633 tcaataccaacggcaatggcttcttgaccgacagaggagtgacagaaacctctaattttc 692 Query: 581 ttagccttgtacaaagcgttacaggccatttccattcttctaaccataatcatatccttg 640 ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 693 ttagccttgtacaaagcgtcacaggccatttccattcttctaacgataatcatatccttg 752 Query: 641 tacctttgtagcaaattggacttggtgggttttgattacttaatttaggaacat 694 ||| |||||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 753 tacatttgtagcaaattggacttggtgg--tttgataacttaattcaggaacat 804 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6885 Number of Sequences: 1807 Number of extensions: 6885 Number of successful extensions: 42 Number of sequences better than 1.0e-20: 1 length of query: 1004 length of database: 10,358,551 effective HSP length: 16 effective length of query: 988 effective length of database: 10,329,639 effective search space: 10205683332 effective search space used: 10205683332 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)