BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC4ZC07RM1.SCF screened BAC_end (928 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1779 1231 0.0 >3x_Contig1779 Length = 24855 Score = 1231 bits (621), Expect = 0.0 Identities = 688/700 (98%), Gaps = 9/700 (1%) Strand = Plus / Plus Query: 48 tgcggtgatgaattatccttatcagtgtcaaagttttctgcaaactgtctaggtgcatgt 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13070 tgcggtgatgaattatccttatcagtgtcaaagttttctgcaaactgtctaggtgcatgt 13129 Query: 108 agtgtcttattgaactacctaaacataatgaataacgaggccaacgttggaaactttgaa 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13130 agtgtcttattgaactacctaaacataatgaataacgaggccaacgttggaaactttgaa 13189 Query: 168 gttgtggatcactctctttcgcaatttgtaaagttag--atgcttctgcaatcaaagcac 225 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 13190 gttgtggatcactctctttcgcaatttgtaaagttacgtatgcttctgcaatcaaagcac 13249 Query: 226 taaatgtgttccccacaggctcacagggtaatactgctcttttaagcgtcggctctcctc 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13250 taaatgtgttccccacaggctcacagggtaatactgctcttttaagcgtcggctctcctc 13309 Query: 286 aaaaatgttcaagtcttttccagttgttgaatagatgtaaaactaattccggcgtaaggt 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13310 aaaaatgttcaagtcttttccagttgttgaatagatgtaaaactaattccggcgtaaggt 13369 Query: 346 tgttgaacgagtggctgaagcaacccttgaccgacatcgaccagattaccaaaaggcatg 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13370 tgttgaacgagtggctgaagcaacccttgaccgacatcgaccagattaccaaaaggcatg 13429 Query: 406 atctagttgaatttttcatggatcagttagaattaagatcttctctacaagaagaatgct 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13430 atctagttgaatttttcatggatcagttagaattaagatcttctctacaagaagaatgct 13489 Query: 466 tacctagtgttccagatatccgcagactaacaaagaaacttcaaaaaaatgggaacttag 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13490 tacctagtgttccagatatccgcagactaacaaagaaacttcaaaaaaatgggaacttag 13549 Query: 526 aagatgttctcaagatttatcagtttgcacaaatggttccagttatttcagatctgttga 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13550 aagatgttctcaagatttatcagtttgcacaaatggttccagttatttcagatctgttga 13609 Query: 586 aacagaagaccgaagaggttgattctaatgatttaatgatactcgtgaaagaaggtttac 645 |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 13610 aacagaagaccgaagaggttgattctaatgatttaatgatactcgtgaaagaggttttac 13669 Query: 646 tcgatccaatgttatgaaaatgcaaatccttcttgagaaattgaaagaagttggtagaga 705 |||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 13670 tcgatccaatgtta-gaaaatgcaaatcc-tcttgagaaattgaaag-agttggtagaga 13726 Query: 706 ccactggttgatcttagaaggcttacgagggaaacaaatg 745 ||||| ||||||| ||||| |||||||| ||||||||||| Sbjct: 13727 ccact-gttgatc-tagaa-gcttacga-ggaaacaaatg 13762 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7744 Number of Sequences: 1807 Number of extensions: 7744 Number of successful extensions: 56 Number of sequences better than 1.0e-20: 1 length of query: 928 length of database: 10,358,551 effective HSP length: 16 effective length of query: 912 effective length of database: 10,329,639 effective search space: 9420630768 effective search space used: 9420630768 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)