BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC4ZC08RM1.SCF screened BAC_end (1011 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1698 864 0.0 >3x_Contig1698 Length = 21001 Score = 864 bits (436), Expect = 0.0 Identities = 478/487 (98%), Gaps = 4/487 (0%) Strand = Plus / Plus Query: 45 ctttcttggattcaaaaccttcaacaatgctaccaacgtcaaatcgaaatatgacaaaaa 104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15086 ctttcttggattcaaaaccttcaacaatgctaccaacgtcaaatcgaaatatgacaaaaa 15145 Query: 105 ttcatcaacgaactggcctttattaaactgtacaatctctgtcattaacccaaatactga 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15146 ttcatcaacgaactggcctttattaaactgtacaatctctgtcattaacccaaatactga 15205 Query: 165 attcgttatcgaaggacgcagattattgatacctctgtaaagaactttacagtaattatt 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15206 attcgttatcgaaggacgcagattattgatacctctgtaaagaactttacagtaattatt 15265 Query: 225 aagtatatcacggataataacggatccgtattgcacaacactggtattcgaattcaaaat 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15266 aagtatatcacggataataacggatccgtattgcacaacactggtattcgaattcaaaat 15325 Query: 285 ggcaattagttttttgagctttatagtagtttcagcaaacttagcatgttcattcacctg 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15326 ggcaattagttttttgagctttatagtagtttcagcaaacttagcatgttcattcacctg 15385 Query: 345 tgcataatatgaccaaccttgtgtgcattgcacagcaagtcccttttgggaaaaactcag 404 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 15386 tgcataatatgaccaaccttgtgtgcattgcacagcaagtccctttt-ggaaaaactcag 15444 Query: 405 ctacagggccggtaattatttggaaacatcaacattgagtaaatcaataccngtgataag 464 |||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 15445 ctacaggg-cggtaatta-ttggaaacatcaacattgagtaaatcaataccgttgataag 15502 Query: 465 aatctgcaggtcatcaaattaaccactgctcacattactaacacttggaaagtttctggt 524 ||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||| | Sbjct: 15503 aatctgcaggtcatcaaataaaccactgctcacattactaacacttgg-aaggttctgtt 15561 Query: 525 tccattt 531 ||||||| Sbjct: 15562 tccattt 15568 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 18,692 Number of Sequences: 1807 Number of extensions: 18692 Number of successful extensions: 340 Number of sequences better than 1.0e-20: 1 length of query: 1011 length of database: 10,358,551 effective HSP length: 16 effective length of query: 995 effective length of database: 10,329,639 effective search space: 10277990805 effective search space used: 10277990805 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)