BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC4ZC10FM1.SCF screened BAC_end (897 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1205 1191 0.0 >3x_Contig1205 Length = 5507 Score = 1191 bits (601), Expect = 0.0 Identities = 667/684 (97%), Gaps = 4/684 (0%) Strand = Plus / Plus Query: 86 tgactggagtctgttcacgaaccattcaacatgcagattcccaagtgaatcgattagaga 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3565 tgactggagtctgttcacgaaccattcaacatgcagattcccaagtgaatcgattagaga 3624 Query: 146 ttacgtccgataagaaatatttggctgctgctggtcatttacacgtccgtctttatgata 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3625 ttacgtccgataagaaatatttggctgctgctggtcatttacacgtccgtctttatgata 3684 Query: 206 tacggtcgaataatccaaatccggtgtcctctttcgaaggccataaagggaacgtaacgt 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3685 tacggtcgaataatccaaatccggtgtcctctttcgaaggccataaagggaacgtaacgt 3744 Query: 266 cgattgcatttcaacaggaaaatcgatggatggtatcgtctagtgaagatgggactatta 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3745 cgattgcatttcaacaggaaaatcgatggatggtatcgtctagtgaagatgggactatta 3804 Query: 326 aggtttgggatgtacggtccccatctgtgcaaaggaattacaagcataatgcacctgtca 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3805 aggtttgggatgtacggtccccatctgtgcaaaggaattacaagcataatgcacctgtca 3864 Query: 386 atgaagtagcgatacatccgaaccaaggggaattgatttcctgcgatcaggatgggaata 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3865 atgaagtagcgatacatccgaaccaaggggaattgatttcctgcgatcaggatgggaata 3924 Query: 446 tcaggatttgggatcttggtgaaaaccagtgcacaaaccagctgacaccagaagataaca 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3925 tcaggatttgggatcttggtgaaaaccagtgcacaaaccagctgacaccagaagataaca 3984 Query: 506 cgccattacagtcgttgtccgttgcaagcgacggatcgatgcttgttgcaggaaataaca 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3985 cgccattacagtcgttgtccgttgcaagcgacggatcgatgcttgttgcaggaaataaca 4044 Query: 566 nagggaactgttatgtatggaagatgcctcatcacacggatgctttcactttgggagccc 625 |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 4045 aagggaactgttatgtatggaagatgcctcatcacacggatgcttccacttt-ggagccc 4103 Query: 626 gtaacttaattcaaatcgcatacttaatatattaccagggtcccactattggcggattgt 685 |||||| ||||||||||||||||| |||||||||||||||||| ||||| |||||| ||| Sbjct: 4104 gtaactaaattcaaatcgcatactaaatatattaccagggtcctactatcggcgga-tgt 4162 Query: 686 aaaacatttagccacatggttcagcaaaccttacagctagagttttgaatttagagggat 745 |||||||||||| |||| |||||||| ||| |||||||||||| | |||| |||| |||| Sbjct: 4163 aaaacatttagcaacat-gttcagcagaccatacagctagagtatggaatataga-ggat 4220 Query: 746 atttttgaacttgaaaccacttta 769 | |||||||||||||||||||||| Sbjct: 4221 aattttgaacttgaaaccacttta 4244 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4904 Number of Sequences: 1807 Number of extensions: 4904 Number of successful extensions: 31 Number of sequences better than 1.0e-20: 1 length of query: 897 length of database: 10,358,551 effective HSP length: 16 effective length of query: 881 effective length of database: 10,329,639 effective search space: 9100411959 effective search space used: 9100411959 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)