BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC4ZD07FM1.SCF screened BAC_end (915 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig355 500 e-141 >3x_Contig355 Length = 1564 Score = 500 bits (252), Expect = e-141 Identities = 292/299 (97%), Gaps = 5/299 (1%) Strand = Plus / Plus Query: 394 ttctccaattggctntagattcttagcagatatttctggatgtggaccgataaataatgc 453 ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ttctccaat-ggcttaagattcttagcagatatttctggatgtggaccgataaataatgc 59 Query: 454 tttaccctttccaaagcttgataacactatagcagcagcagcagcagtagcatcttgatt 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 tttaccctttccaaagcttgataacactatagcagcagcagcagcagtagcatcttgatt 119 Query: 514 cgcagcatttggatcatcggagaagggaacgtcaacggagtcttcatactctgctagtac 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 cgcagcatttggatcatcggagaagggaacgtcaacggagtcttcatactctgctagtac 179 Query: 574 ttcgacgtttggatatttttcggcgtcaacgaaaagcgcaccaccgttatagtaggagta 633 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 ttcgacgtttggatatttttcggcgtcaacgaaaagcgcaccaccgttatagtaggagta 239 Query: 634 agcttctttggagatttttcaattccatttactttttaacttgacagttcttggcacca 692 |||||| ||||||| ||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 240 agcttc-ttggaga-ttttcaattccatttac-ttttaacttgacag-tcttggcacca 294 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7749 Number of Sequences: 1807 Number of extensions: 7749 Number of successful extensions: 235 Number of sequences better than 1.0e-20: 1 length of query: 915 length of database: 10,358,551 effective HSP length: 16 effective length of query: 899 effective length of database: 10,329,639 effective search space: 9286345461 effective search space used: 9286345461 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)