BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC4ZE01RM1.SCF screened BAC_end (865 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1476 1524 0.0 >3x_Contig1476 Length = 8689 Score = 1524 bits (769), Expect = 0.0 Identities = 803/813 (98%), Gaps = 1/813 (0%) Strand = Plus / Plus Query: 46 aattgttggagcatacaatttagaatgacttctacaattttaccactcaattgaattcca 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1947 aattgttggagcatacaatttagaatgacttctacaattttaccactcaattgaattcca 2006 Query: 106 attttgcaaaattttagacctaatcgatagttcgtatcctttatatactttaaaatccaa 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2007 attttgcaaaattttagacctaatcgatagttcgtatcctttatatactttaaaatccaa 2066 Query: 166 atcaaagtaccaatgccttaccccgaattaccaatacaaatgactagcctaagatgaaaa 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2067 atcaaagtaccaatgccttaccccgaattaccaatacaaatgactagcctaagatgaaaa 2126 Query: 226 ccttaagacagacacaagaaaatatactttcgaacaatgacaaatgttcaaaatgtataa 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2127 ccttaagacagacacaagaaaatatactttcgaacaatgacaaatgttcaaaatgtataa 2186 Query: 286 taatgtataatgatgtataataacattgatatttctgagggagtgctgatccttttgcaa 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2187 taatgtataatgatgtataataacattgatatttctgagggagtgctgatccttttgcaa 2246 Query: 346 cttactcatcttatataagctctcatcgggtcctgcaataaagttcctctccctttagta 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2247 cttactcatcttatataagctctcatcgggtcctgcaataaagttcctctccctttagta 2306 Query: 406 agagctgacacattttttttttctgtctacatttaataagcaagtattcgcaacgagtgt 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2307 agagctgacacattttttttttctgtctacatttaataagcaagtattcgcaacgagtgt 2366 Query: 466 gatgcagggatgcttatcgtggtgcattaccctgattagtcagggtaataaactcagtgt 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2367 gatgcagggatgcttatcgtggtgcattaccctgattagtcagggtaataaactcagtgt 2426 Query: 526 ctgcttcaacacatttgacttttatggttttcagtcaagtaaatattgaaatccatatga 585 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2427 ctgcttcaacacatttgacttttatggttttcagtcaagtaaatattgacatccatatga 2486 Query: 586 aaggatgaacttattattcaattcagagtaattatttgttaataacgataacacattaca 645 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2487 caggatgaacttattattcaattcagagtaattatttgttaataacgataacacattaca 2546 Query: 646 ttctttattaatgatgttttcttggctaaaaaacgaataatattgatcatagacaactgc 705 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2547 ttctttattaatgatgttttcttggctaaaaaacgaataatattgatcatagacaactgc 2606 Query: 706 agtgatcgagcaaactacaccttgttataagaaatacggtatattggatattctggtgaa 765 |||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||| Sbjct: 2607 agtgatcgagcaaactacacctcgttataagacatacgttatattggatattctggtgaa 2666 Query: 766 cgttttatatactaaggaaaaaaatacgatagaaaagtttgtcccttgttaatcatcata 825 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 2667 cgttttatatactaaggaaaaaaatacgatagaatagtttgt-ccttgttaatcatcata 2725 Query: 826 ggttatcttcaaatttaaggggaaaaggaaaag 858 |||||||||||||||||||| || ||| ||||| Sbjct: 2726 ggttatcttcaaatttaaggagagaagaaaaag 2758 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8790 Number of Sequences: 1807 Number of extensions: 8790 Number of successful extensions: 62 Number of sequences better than 1.0e-20: 1 length of query: 865 length of database: 10,358,551 effective HSP length: 16 effective length of query: 849 effective length of database: 10,329,639 effective search space: 8769863511 effective search space used: 8769863511 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)