BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC4ZE02FM1.SCF screened BAC_end (906 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1627 1298 0.0 >3x_Contig1627 Length = 15708 Score = 1298 bits (655), Expect = 0.0 Identities = 706/719 (98%), Gaps = 3/719 (0%) Strand = Plus / Plus Query: 89 tcctctggctagtttccgctctacatagaaatgttgaaaacatgaaatttttcaacacgt 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 225 tcctctggctagtttccgctctacatagaaatgttgaaaacatgaaatttttcaacacgt 284 Query: 149 acaagatgatatcaaaaaccatattaaaaacctgtctatgcataaagacattggggcact 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 285 acaagatgatatcaaaaaccatattaaaaacctgtctatgcataaagacattggggcact 344 Query: 209 tatgcttaattgcttt-atcgataagctgttctaagaaacactcttcgctaattccagct 267 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 345 tatgcttaattgcaatcatcgataagctgttctaagaaacactcttcgctaattccagct 404 Query: 268 ccgaaaagactaaataaccagaccaaacatgaactctgtactgaaaatgaatactgagtt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 405 ccgaaaagactaaataaccagaccaaacatgaactctgtactgaaaatgaatactgagtt 464 Query: 328 gggatatcaagagtatctcgagaaaattactcttgaagccaatggtgtaaccagcgatga 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 465 gggatatcaagagtatctcgagaaaattactcttgaagccaatggtgtaaccagcgatga 524 Query: 388 gacgacgttacacagcaaggtggcagacatatttcgagaagaaattgaagtaaacggctg 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 525 gacgacgttacacagcaaggtggcagacatatttcgagaagaaattgaagtaaacggctg 584 Query: 448 tttgagggaaagtttcaatgtttatgaggatgtggatggcaatattgaaaaatggagaag 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 585 tttgagggaaagtttcaatgtttatgaggatgtggatggcaatattgaaaaatggagaag 644 Query: 508 tcaaatatggcttgagagaccagaaatgtccgcagaagtccgatacgcatatttgaagca 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 645 tcaaatatggcttgagagaccagaaatgtccgcagaagtccgatacgcatatttgaagca 704 Query: 568 ccaggaattgtgtctcgaaagactgatatccaaaacgctgccgaaacagcttattgtaca 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 705 ccaggaattgtgtctcgaaagactgatatccaaaacgctgccgaaacagcttattgtaca 764 Query: 628 ggaagaaatgttgaagtcagttacagaacagatcagaggtgtgctagaaactcaaaaaca 687 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 765 agaagaaatgttgaagtcagttacagaacagatcagaggtgtgctagaaactcagaaaca 824 Query: 688 acagttggaacaattatttcaatacagaactaacatggaagaatcttatagacaggaaat 747 ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| Sbjct: 825 acagttggaacaattatctcaatacagaactaacatggaagaatctcatagacaggaaat 884 Query: 748 ggattcattgaataaccgctggcgggtgaagtttgaattacaattttagaaaaggcaac 806 |||||||||||||||||||||||| ||| | |||||| |||| ||||||||||||||| Sbjct: 885 tgattcattgaataaccgctggcggttgacg-ttgaatgacaa-tttagaaaaggcaac 941 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8040 Number of Sequences: 1807 Number of extensions: 8040 Number of successful extensions: 55 Number of sequences better than 1.0e-20: 1 length of query: 906 length of database: 10,358,551 effective HSP length: 16 effective length of query: 890 effective length of database: 10,329,639 effective search space: 9193378710 effective search space used: 9193378710 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)