BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC4ZE02RM1.SCF screened BAC_end (902 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1031 1445 0.0 >3x_Contig1031 Length = 5135 Score = 1445 bits (729), Expect = 0.0 Identities = 783/793 (98%), Gaps = 6/793 (0%) Strand = Plus / Plus Query: 48 tagaaaatgaaaaagtgaaagaaattgatgaattagtgaaaaaaaattcgaaatacacag 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1328 tagaaaatgaaaaagtgaaagaaattgatgaattagtgaaaaaaaattcgaaatacacag 1387 Query: 108 tgggattaacaatatattttcaagaaaaagcttagagcagcttcagtactggttcaagga 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1388 tgggattaacaatatattttcaagaaaaagcttagagcagcttcagtactggttcaagga 1447 Query: 168 ttattcggaaccaacagcaatagcagattctgatcgaactcagaagtataaaatattgaa 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1448 ttattcggaaccaacagcaatagcagattctgatcgaactcagaagtataaaatattgaa 1507 Query: 228 aagatgagaccaattgttttgaagggtcatgaacgtccattaacgcaagttaagttcaac 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1508 aagatgagaccaattgttttgaagggtcatgaacgtccattaacgcaagttaagttcaac 1567 Query: 288 cgtgatggtgacttagtttttgcttgctccaaagatagtgttgcctctatctggtacgct 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1568 cgtgatggtgacttagtttttgcttgctccaaagatagtgttgcctctatctggtacgct 1627 Query: 348 atcaacggtgaaagattaggtactctagatgatcattctggtactatctggtctattgat 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1628 atcaacggtgaaagattaggtactctagatgatcattctggtactatctggtctattgat 1687 Query: 408 gttgatgaaagcacaacttatgcgttgactggtggtgctgatttctgtttcaagatctgg 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1688 gttgatgaaagcacaacttatgcgttgactggtggtgctgatttctgtttcaagatctgg 1747 Query: 468 aaagttgctacaggtgtagcagtccattctgtctctaccagaagtccagttttgagagtc 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1748 aaagttgctacaggtgtagcagtccattctgtctctaccagaagtccagttttgagagtc 1807 Query: 528 gaattttctccagacggtagcaaacttttgattgtacttgatgccgttatgggtcacatt 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1808 gaattttctccagacggtagcaaacttttgattgtacttgatgccgttatgggtcacatt 1867 Query: 588 ggttccattgttgtttactctttgatcagaaacgaaaacggtgaaatcgtgaatgtgaag 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1868 ggttccattgttgtttactctttgatcagaaacgaaaacggtgaaatcgtgaatgtgaag 1927 Query: 648 gaggaaccagactacgaaattacaaccatcgagcaagctaccaaggtgttcgttgcatct 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1928 gaggaaccagactacgaaattacaaccatcgagcaagctaccaaggtgttcgttgcatct 1987 Query: 708 tggtcctacaatggtaagtacatcattagca-gtcatgaagatggtcaaatcagtgctta 766 ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 1988 tggtcctacaatggtaagtacatca-tagcaggtcatgaagatggtcaaatcagtgctta 2046 Query: 767 ctacggttgaaaacggggaattcgttcaagccaaggatgattccacgaaaagagccatca 826 |||||| ||||||||||||||||||||||| ||| || || ||||||||||||| ||||| Sbjct: 2047 ctacgg-tgaaaacggggaattcgttcaag-caaagaaga-tccacgaaaagag-catca 2102 Query: 827 aggatttccaatt 839 | ||| ||||||| Sbjct: 2103 aagatatccaatt 2115 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7703 Number of Sequences: 1807 Number of extensions: 7703 Number of successful extensions: 65 Number of sequences better than 1.0e-20: 1 length of query: 902 length of database: 10,358,551 effective HSP length: 16 effective length of query: 886 effective length of database: 10,329,639 effective search space: 9152060154 effective search space used: 9152060154 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)