BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC4ZE05RM1.SCF screened BAC_end (909 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1471 1084 0.0 >3x_Contig1471 Length = 8032 Score = 1084 bits (547), Expect = 0.0 Identities = 598/611 (97%), Gaps = 3/611 (0%) Strand = Plus / Plus Query: 140 tatctaataagttgactactgctaccgaactgtcagatgatttggatgctgctacccagc 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tatctaataagttgactactgctaccgaactgtcagatgatttggatgctgctacccagc 60 Query: 200 tggcagaggctaaaaagaaagttacagcagccaatgatacacaattacagaaatatatcg 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tggcagaggctaaaaagaaagttacagcagccaatgatacacaattacagaaatatatcg 120 Query: 260 aagaacaagaccccatgatcaaaagtttaccagaatttttgttaccaagagttaagaagg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aagaacaagaccccatgatcaaaagtttaccagaatttttgttaccaagagttaagaagg 180 Query: 320 aattctatgaacaacaggttaggttgaacggtgggttttacgacaaaagcgtgcgcccta 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 aattctatgaacaacaggttaggttgaacggtgggttttacgacaaaagcgtgcgcccta 240 Query: 380 aagatcgttctttgagattaacgaatgaagaattagaagtgcttgaacctagtgtctatg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 aagatcgttctttgagattaacgaatgaagaattagaagtgcttgaacctagtgtctatg 300 Query: 440 ttaaatcttacagagtaaaatcatctatgaagaaggccacacagctgcttagacttttga 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ttaaatcttacagagtaaaatcatctatgaagaaggccacacagctgcttagacttttga 360 Query: 500 acggattggacgctaagaaagctttgactcaatgtcatttctccgataaaaaggttgccc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 acggattggacgctaagaaagctttgactcaatgtcatttctccgataaaaaggttgccc 420 Query: 560 gtgatgttgccgaattattggagcgcggtattaatgatggtgtgaagcttggcttggatg 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 gtgatgttgccgaattattggagcgcggtattaatgatggtgtgaagcttggcttggatg 480 Query: 620 ccaatgacctatacatctcccagatatggaccggcagtgatggatttttggcaaaacgtg 679 |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct: 481 ccaatgacctatacatctcccagatatggaccggcagtgatggattttggcaaaaacgtg 540 Query: 680 ttcaatgggaaggtagagggtagacctggtcttattggaacacccatatgttgcatatta 739 | ||||| | |||||| ||||||| |||||| ||| ||||||||||||| ||||||| | Sbjct: 541 tcgaatggaagggtaga-ggtagacgtggtctcatt-gaacacccatatg-tgcatatca 597 Query: 740 aatgcatattg 750 ||||||||||| Sbjct: 598 aatgcatattg 608 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6239 Number of Sequences: 1807 Number of extensions: 6239 Number of successful extensions: 42 Number of sequences better than 1.0e-20: 1 length of query: 909 length of database: 10,358,551 effective HSP length: 16 effective length of query: 893 effective length of database: 10,329,639 effective search space: 9224367627 effective search space used: 9224367627 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)