BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC4ZE08RM1.SCF screened BAC_end (962 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig760 787 0.0 >3x_Contig760 Length = 2736 Score = 787 bits (397), Expect = 0.0 Identities = 465/481 (96%), Gaps = 5/481 (1%) Strand = Plus / Plus Query: 47 tatttctttgcacatacgtcaagagagcatgtttatttagttgtaagagtatttaaatct 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1527 tatttctttgcacatacgtcaagagagcatgtttatttagttgtaagagtatttaaatct 1586 Query: 107 caatatattgccaaaacacatggccttacgcgccttccatgtcattaatcaactgcagct 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1587 caatatattgccaaaacacatggccttacgcgccttccatgtcattaatcaactgcagct 1646 Query: 167 cttccctagtacaagtcatggatagcctaggttccttcaaatttaaggtccctttttctt 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1647 cttccctagtacaagtcatggatagcctaggttccttcaaatttaaggtccctttttctt 1706 Query: 227 tcaaaaaataaatgagacgaataacgatatcgtaaagaactcttaagttaaaatttacta 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1707 tcaaaaaataaatgagacgaataacgatatcgtaaagaactcttaagttaaaatttacta 1766 Query: 287 cagttataggcaaaaatctaccagtgaagaagtggatttagagacaattaacctgtcatt 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1767 cagttataggcaaaaatctaccagtgaagaagtggatttagagacaattaacctgtcatt 1826 Query: 347 ttaaaggtaaattgggttgaacataaattcacactgtgaaaatcatattatgtctgaatt 406 || ||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1827 tt-aaggtaaattgtggtgaacatcaattcacactgtgaaaatcatattatgtctgaatt 1885 Query: 407 tgaaaagattgtgagagatattgaattcgattcccctccagaggaaaactcttttggttt 466 ||| ||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||| Sbjct: 1886 tgagaagattgtgagagatattgtattcgattcccctccagaggaaatctc-tttggttt 1944 Query: 467 acgataattttacaagtgtttaaaccatgggtcaaagcaagccacagattgctttaatta 526 ||||||| | |||||||| |||| | || ||||||||||||| ||||||||||| ||||| Sbjct: 1945 acgataa-tctacaagtg-ttaagcgat-ggtcaaagcaagcaacagattgcttcaatta 2001 Query: 527 t 527 | Sbjct: 2002 t 2002 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8813 Number of Sequences: 1807 Number of extensions: 8813 Number of successful extensions: 62 Number of sequences better than 1.0e-20: 1 length of query: 962 length of database: 10,358,551 effective HSP length: 16 effective length of query: 946 effective length of database: 10,329,639 effective search space: 9771838494 effective search space used: 9771838494 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)