BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC4ZE11RM1.SCF screened BAC_end (924 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1169 1229 0.0 >3x_Contig1169 Length = 5264 Score = 1229 bits (620), Expect = 0.0 Identities = 671/684 (98%), Gaps = 3/684 (0%) Strand = Plus / Minus Query: 45 ctttcgcgtatgctttactaatgtcctggaatataatttccatgtacattttcgttaata 104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3819 ctttcgcgtatgctttactaatgtcctggaatataatttccatgtacattttcgttaata 3760 Query: 105 tgttcgtttccttaatcgtagaaaagttcagctacgtctatcatagagaggaaaataagc 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3759 tgttcgtttccttaatcgtagaaaagttcagctacgtctatcatagagaggaaaataagc 3700 Query: 165 actcaccagcaagccaagaagaagtgaggaaattcaaagtggcatggagggaaattgatc 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3699 actcaccagcaagccaagaagaagtgaggaaattcaaagtggcatggagggaaattgatc 3640 Query: 225 ctgatggtgtagggcaatttgatgtcgcgtacttaccaaaattcatgcactcgtttgatg 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3639 ctgatggtgtagggcaatttgatgtcgcgtacttaccaaaattcatgcactcgtttgatg 3580 Query: 285 gacccctctcgtttaaaatttgggagggaagacttactgttaagagtttggtgtctaaat 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3579 gacccctctcgtttaaaatttgggagggaagacttactgttaagagtttggtgtctaaat 3520 Query: 345 acatgaaagtaaacccaaacgatccatatgatgttgaaattgatcacttcggactcagca 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3519 acatgaaagtaaacccaaacgatccatatgatgttgaaattgatcacttcggactcagca 3460 Query: 405 aagaactttcctctatagactatcaaaaagtgtacgccagacgactagattataacagat 464 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3459 aagaactttcctctatagactatcaaaaagtgaacgccagacgactagattataacagat 3400 Query: 465 ttgatcatgaaattcagctgggaaataagagatacaacgccgtgcagttcaatcagctga 524 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3399 ttgtccatgaaattcagctgggaaataagagatacaacgccgtgcagttcaatcagctga 3340 Query: 525 tggaaacagttccattgtacactacatataacaagactgaatgtcttgggatcgatgatt 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3339 tggaaacagttccattgtacactacatataacaagactgaatgtcttgggatcgatgatt 3280 Query: 585 atgtgaaaaatttatacgacatgaacaaagttgataaactgatccggaacgagaaaaact 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 3279 atgtgaaaaatttatacgacatgaacaaagttgataaactgatccggaacgagagaaact 3220 Query: 645 acgataccatgcttatggtttgccgcaaggatggaaatttttactgtacccgttgaggca 704 ||||||||||||| |||| ||| ||||| ||||||||||||||||| | |||| |||||| Sbjct: 3219 acgataccatgctaatgg-ttgtcgcaa-gatggaaatttttactg-aaccgtagaggca 3163 Query: 705 agatccaacttcctaaaataatgg 728 |||| ||||| ||||||||||||| Sbjct: 3162 agatacaactacctaaaataatgg 3139 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7343 Number of Sequences: 1807 Number of extensions: 7343 Number of successful extensions: 56 Number of sequences better than 1.0e-20: 1 length of query: 924 length of database: 10,358,551 effective HSP length: 16 effective length of query: 908 effective length of database: 10,329,639 effective search space: 9379312212 effective search space used: 9379312212 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)