BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC4ZF07RM1.SCF screened BAC_end (969 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1582 1067 0.0 >3x_Contig1582 Length = 14087 Score = 1067 bits (538), Expect = 0.0 Identities = 564/570 (98%), Gaps = 2/570 (0%) Strand = Plus / Minus Query: 45 cttcggcatcagtactgtcaagtgcagcttcgaatgctttgaaaacctttcttacgatta 104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 866 cttcggcatcagtactgtcaagtgcagcttcgaatgctttgaaaacctttcttacgatta 807 Query: 105 tcgaatatgaaccaattaactgtttcataacatgaatcatgcattgctgtgcgggtctgt 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 806 tcgaatatgaaccaattaactgtttcataacatgaatcatgcattgctgtgcgggtctgt 747 Query: 165 gaatgtttggatacaccgatagagataaagaaatgacatcattcaaaagtttctattcca 224 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 746 gaatgtttggatacaccgatagagataaagaaatgacatcattcaaaagtttcaattcca 687 Query: 225 gtttcgatggtttcctattagttgaatataaggtaagtctagactggtgaagttcctgac 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 686 gtttcgatggtttcctattagttgaatataaggtaagtctagactggtgaagttcctgac 627 Query: 285 agtcagctgcgagatacgttcttgtaaatggaaggaacggttcctcccagtgtgctatgt 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 626 agtcagctgcgagatacgttcttgtaaatggaaggaacggttcctcccagtgtgctatgt 567 Query: 345 cttgtatgttttctaggaatttcacagatatcgacgcctttggatcatcaatgaatatag 404 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 566 cttgtatgttttctaggaattccacagatatcgacgcctttggatcatcaatgaatatag 507 Query: 405 tttcttgcccaacatcagtaaaccagaccttcaaaccatgtaataaagtctggaatacgg 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 506 tttcttgcccaacatcagtaaaccagaccttcaaaccatgtaataaagtctggaatacgg 447 Query: 465 atgttgaattctcataattttgatttaaaaatttgaagagcttgtgtaagaataaaccaa 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 446 atgttgaattctcataattttgatttaaaaatttgaagagcttgtgtaagaataaaccaa 387 Query: 525 tctcgtgtctcaaatgatgtatttttgagtatctgggatcaagcgcacgttcagctggtt 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 386 tctcgtgtctcaaatgatgtatttttgagtatctgggatcaagcgcacgttcagct-gct 328 Query: 585 gttcttccaaagaaattatttgtacgaaaa 614 ||||||||||||||| || ||||||||||| Sbjct: 327 gttcttccaaagaaa-taattgtacgaaaa 299 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7856 Number of Sequences: 1807 Number of extensions: 7856 Number of successful extensions: 54 Number of sequences better than 1.0e-20: 1 length of query: 969 length of database: 10,358,551 effective HSP length: 16 effective length of query: 953 effective length of database: 10,329,639 effective search space: 9844145967 effective search space used: 9844145967 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)