BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC4ZF11RM1.SCF screened BAC_end (955 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1449 1003 0.0 >3x_Contig1449 Length = 7865 Score = 1003 bits (506), Expect = 0.0 Identities = 524/530 (98%) Strand = Plus / Plus Query: 47 tgaaaacgttatcggtgacgttattcaaccagccggtctgggaacataggaatttatcta 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2691 tgaaaacgttatcggtgacgttattcaaccagccggtctgggaacataggaatttatcta 2750 Query: 107 gttttgccaccacagaatctttcttgacaatggcaagaacatctagtggttcatcagcgt 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2751 gttttgccaccacagaatctttcttgacaatggcaagaacatctagtggttcatcagcgt 2810 Query: 167 aagaagtgaaatctgattcgttcaagtctctcaaataagaagcaactgattgatcaccgg 226 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 2811 aagaagtgaaatctgattcgttcaagtctctcaaataagaagcaactgattgagcaccgg 2870 Query: 227 attggatgtctgggtcactttgtaagatatctctcaaagcgtcagaggatgggaattcct 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2871 attggatgtctgggtcactttgtaagatatctctcaaagcgtcagaggatgggaattcct 2930 Query: 287 gtaaagtagatcttcgaattaacttgtagcctcttctaatcaaagtacctgcaccagaat 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2931 gtaaagtagatcttcgaattaacttgtagcctcttctaatcaaagtacctgcaccagaat 2990 Query: 347 cggtgaacaattctttttgcaaatcttgaacattgatgatggccacggacgaagatcttg 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2991 cggtgaacaattctttttgcaaatcttgaacattgatgatggccacggacgaagatcttg 3050 Query: 407 gcaagaagtccaacaaatctttaatttctttgattttcaacttagttccgaacttgaccc 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3051 gcaagaagtccaacaaatctttaatttctttgattttcaacttagttccgaacttgaccc 3110 Query: 467 aactttgcttcatcaattcatcgtattcttcatctaagttaatcactggtaccttctcac 526 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 3111 aactttgcttcatcaattcatcgtattcttcatctaagttaatcactgaaaccttctcac 3170 Query: 527 cggtgctaccgtttatgatcccgcccttctcattcaagtaaaccattttt 576 ||||||||||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 3171 cggtgctaccgttaatgataccgcccttctcattcaagtaaacaattttt 3220 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7356 Number of Sequences: 1807 Number of extensions: 7356 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 955 length of database: 10,358,551 effective HSP length: 16 effective length of query: 939 effective length of database: 10,329,639 effective search space: 9699531021 effective search space used: 9699531021 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)