BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC4ZG01FM1.SCF screened BAC_end (875 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1628 1384 0.0 >3x_Contig1628 Length = 12927 Score = 1384 bits (698), Expect = 0.0 Identities = 764/778 (98%), Gaps = 6/778 (0%) Strand = Plus / Minus Query: 87 ggaagtcttcgaaacaagatacagaagattggtagagacaagacaacaacgttatggttc 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4544 ggaagtcttcgaaacaagatacagaagattggtagagacaagacaacaacgttatggttc 4485 Query: 147 cttcgactacgatccagaagaagaattacaacgttacaaaagttacagagaacaattaaa 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4484 cttcgactacgatccagaagaagaattacaacgttacaaaagttacagagaacaattaaa 4425 Query: 207 gccattcgttgtcgattcggttaacttcatgcacgacgcaatcaagaaaaataagaagat 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4424 gccattcgttgtcgattcggttaacttcatgcacgacgcaatcaagaaaaataagaagat 4365 Query: 267 tcttgtcgaaggtgccaatgctctaatgctagacattgacttcggaacttatccgtatgt 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4364 tcttgtcgaaggtgccaatgctctaatgctagacattgacttcggaacttatccgtatgt 4305 Query: 327 taccagttctaacactggtattggtggtgtcatcacgggtctaggtattcctccacgtac 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4304 taccagttctaacactggtattggtggtgtcatcacgggtctaggtattcctccacgtac 4245 Query: 387 tatcaaggaagtgtttggtgttgtcaaggcttacactactagagtcggtgaaggtccatt 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4244 tatcaaggaagtgtttggtgttgtcaaggcttacactactagagtcggtgaaggtccatt 4185 Query: 447 cccgaccgaacaactaaacgaagacggtgaaaaacttcaaaatattggtgcggaattcgg 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4184 cccgaccgaacaactaaacgaagacggtgaaaaacttcaaaatattggtgcggaattcgg 4125 Query: 507 tgtcaccactggtcgtaagcgtcgttgtgggtggttagatctggttgttctgaaatattc 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4124 tgtcaccactggtcgtaagcgtcgttgtgggtggttagatctggttgttctgaaatattc 4065 Query: 567 caatttgatcaatggctatacctctttgaacattacaaaacttgatgttttagatacctt 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4064 caatttgatcaatggctatacctctttgaacattacaaaacttgatgttttagatacctt 4005 Query: 627 caaagagattaaggtcggtgtttcctactctgttgatggtaagaagctggaatctttccc 686 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 4004 caaagagattaaggtcggtgtttcctactctgttgatggtaagaagctagaatctttccc 3945 Query: 687 tgaggacttattgactttagcaaaggtcgaagttgaatatgtcacctttgccaggctggg 746 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 3944 tgaggacttattgactttagcaaaggtcgaagttgaatatgtcacc-ttgccaggctggg 3886 Query: 747 aagaagatatcagcaaaattcccaactttgaaggatctcccagaaaatgctccaaaatta 806 |||||||||||||||||||| |||||| |||| |||||||||||||||||| ||||| || Sbjct: 3885 aagaagatatcagcaaaattaccaactatgaa-gatctcccagaaaatgct-caaaaata 3828 Query: 807 tctaaaggtcatatgaagacattgtttgaagtttcaatccaatgggttgggcactggt 864 ||||||| |||| ||||||| || |||||||| |||||||||||| ||||||||||| Sbjct: 3827 tctaaagttcat-tgaagac-ttcgttgaagttccaatccaatggg-tgggcactggt 3773 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6325 Number of Sequences: 1807 Number of extensions: 6325 Number of successful extensions: 50 Number of sequences better than 1.0e-20: 1 length of query: 875 length of database: 10,358,551 effective HSP length: 16 effective length of query: 859 effective length of database: 10,329,639 effective search space: 8873159901 effective search space used: 8873159901 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)